Definition Vibrio fischeri MJ11 chromosome I, complete sequence.
Accession NC_011184
Length 2,905,029

Click here to switch to the map view.

The map label for this gene is clpB

Identifier: 197335143

GI number:

Start: 602287

End: 604872

Strand: Direct

Name: clpB

Synonym: VFMJ11_0578

Alternate gene names: NA

Gene position: NA

Preceding gene: 197334547

Following gene: 197334562

Centisome position: NA

GC content: NA

Gene sequence:

>2586_bases
ATGCGTTTAGATCGATTCACTAGTAAATTTCAAATGGCCATCTCTGATGCTCAATCATTAGCATTAGGTCAAGATCATCA
ATATATCGAACCAACCCATTTAATGGTTGCACTGTTAAATCAGGATGGAAGTACGATAAGGCCTTTACTTACTCTTCTAA
ATGTAGACGTAACACAATTACGTTCAAAACTAACTGAAATATTAGATAAGACACCAAAGGTAACGGGTATCGGTGGTGAT
GTTCAACTTTCATCTAATATGGGGGTTATTTTTAATCTTTGCGATAAAGTCGCTCAGAAACGCAAAGACGCTTATATCTC
TTCTGAAATATTCATGCTTGCCGCAATCGAAGATAAAGGGCCTTTGGGTAATTTACTTCGAGAATTAGGATTAACTGAAC
CTAAAATATCTAAGTCAATCGATGAGATCCGTGGTGGCGAAAAAGTTAATGATCAAAATGCTGAAGAAAAACGTCAAGCA
TTAGAAAAGTTTACTGTTGATTTAACTGAGCGAGCAGAGCAAGGAAAACTAGATCCTGTTATTGGTCGTGATGATGAAAT
ACGAAGAACAATTCAGGTATTGCAACGTCGAACTAAAAATAATCCAGTTATAATAGGTCAACCTGGTGTCGGCAAGACAG
CTATTGTTGAAGGGTTAGCGCAACGTATTATAAATGGTGAAGTACCTGAAGGTTTAAAAAATAAACGAGTACTTTCTTTA
GATATTGGTGCATTGGTAGCTGGTGCTAAATTCCGAGGTGAATTTGAAGAGCGTTTAAAAGCGGTTTTAAATGAGCTAGC
GAAAGAAGAAGGTAGTGTCATCCTCTTTATTGATGAAGTACATACAATGGTAGGTGCTGGTAAAGGTGAAGGCTCTATGG
ATGCCGGCAACATGCTTAAACCTGCACTCGCACGTGGTGAACTACATTGTGTCGGAGCAACAACTCTTGATGAATATCGT
CAGTATATTGAAAAAGATCCAGCATTAGAGCGTCGTTTCCAAAAAGTACTTGTTGACGAACCAACAGTTGAAGATACCGT
TGCAATTTTGCGTGGTTTAAAAGAGCGCTATGAAATTCATCATCATGTTGAAATTACTGATCCTGCGATCGTAGCAGCAG
CAAGCCTGTCACATCGTTATATTTCAGATCGTCAATTACCGGATAAAGCGATAGATTTAATTGACGAAGCAGCATCAAGC
ATTCGTATGGAAATTGATTCAAAACCAGAATCATTAGATAAGCTTGATCGTAAGATAATTCAATTAAAGATAGAGCAGCA
AGCACTAGTAAAAGAAAGCGATGATGCGAGCTTAAAGCGTCTTGACTCTTTAAATCTTGAATTAATGCAAAAAGAGCGTG
AATACGCAGAGCTTGAAGAAGTGTGGAAAGCTGAAAAAGCGGCTTTATCTGGCACTCAGCATATAAAAACAGAATTAGAA
ACAGCTCGAAGTAATATGGAAATTGCACGTCGTGCAGGTGATCTAAATAGAATGTCAGAGCTGCAATATGGACGTATTCC
AGAATTAGAGAAACAACTAGATCTTGCCGCTCAAGCTGAAATGCAAGAAATGAGCTTATTAAAAAACAAAGTGACGGATG
CAGAGATAGCAGAAGTGCTTTCACGTCAGACGGGCATTCCTGTAAATAAAATGCTTGAAGGTGAAAGAGATAAGCTATTA
AAGATGGAAGAGGTATTACATCACCGAGTAATAGGCCAGGCTGAAGCTGTCGAAGCTGTCTCAAATGCAATTCGTCGTAG
TCGTGCCGGTCTATCAGATCCAAATCGACCAATCGGTTCATTCTTGTTTTTAGGCCCAACAGGGGTTGGTAAAACGGAAT
TATGTAAATCACTCGCTAACTTTATGTTTGATAGTGAAGATGCGATGGTACGTATCGACATGTCAGAGTTTATGGAGAAA
CATTCTGTTGCTCGTTTAGTAGGTGCGCCTCCTGGTTATGTTGGTTATGAAGAGGGTGGATACTTAACAGAAGCAGTAAG
ACGCAAACCTTATTCAGTTTTACTATTAGATGAAGTAGAAAAAGCACATCCAGATGTATTTAATATTCTACTTCAAGTTC
TTGATGATGGTCGTTTAACTGATGGTCAGGGAAGAACGGTTGATTTTAAAAATACCGTTATCATTATGACATCGAACTTA
GGTTCAGAAAAAATTCAGCAGCACTTTGGTGAGTTGAATTATGGTGGCATCAAAGAAATAGTAATGGATGTTGTGAGTCA
ACATTTTAGACCAGAGTTTTTAAACCGTGTTGATGAAACCGTAGTGTTCCATCCATTGGCACAAGAACACATCAAGAATA
TCGCCTCTATTCAATTACAACGCTTAGAAAAACGTTTGAATGAAAAAGATTACCAATTGCAAGTAACAGACGAAGCGTTA
AACTTAATTGCTGAGGCAGGTTTTGATCCTGTTTATGGAGCAAGACCATTAAAACGAGCAATTCAGACATATATAGAGAA
CCCACTTGCTCAGGATATATTGAGTGGAAAGCTAAGGGTTGGAGAAGTAATTAAGTTGAAAGTTAAAAATGAACAGCTAA
TTGCGACTCAAAATGACGACTTTTGA

Upstream 100 bases:

>100_bases
ATTTCTCCCCCTTTATCCTTTCCTTAAGCATTGAACTTTCTGACCTTAGTCCCCATTTAGAAACTATATAGTTACTAGCT
TTCTTCTTTTGGAGGGTGTT

Downstream 100 bases:

>100_bases
TGTAAAAATAAACGCTTTGAATTAAAAGTAAGCAAACAAACTCATTTTTCATGTTTTTCTAGAAAAAGAGTTGCATAGAT
TCAAAGACTCTCTATAATGC

Product: ATP-dependent chaperone ClpB

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>861_residues
MRLDRFTSKFQMAISDAQSLALGQDHQYIEPTHLMVALLNQDGSTIRPLLTLLNVDVTQLRSKLTEILDKTPKVTGIGGD
VQLSSNMGVIFNLCDKVAQKRKDAYISSEIFMLAAIEDKGPLGNLLRELGLTEPKISKSIDEIRGGEKVNDQNAEEKRQA
LEKFTVDLTERAEQGKLDPVIGRDDEIRRTIQVLQRRTKNNPVIIGQPGVGKTAIVEGLAQRIINGEVPEGLKNKRVLSL
DIGALVAGAKFRGEFEERLKAVLNELAKEEGSVILFIDEVHTMVGAGKGEGSMDAGNMLKPALARGELHCVGATTLDEYR
QYIEKDPALERRFQKVLVDEPTVEDTVAILRGLKERYEIHHHVEITDPAIVAAASLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPESLDKLDRKIIQLKIEQQALVKESDDASLKRLDSLNLELMQKEREYAELEEVWKAEKAALSGTQHIKTELE
TARSNMEIARRAGDLNRMSELQYGRIPELEKQLDLAAQAEMQEMSLLKNKVTDAEIAEVLSRQTGIPVNKMLEGERDKLL
KMEEVLHHRVIGQAEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKSLANFMFDSEDAMVRIDMSEFMEK
HSVARLVGAPPGYVGYEEGGYLTEAVRRKPYSVLLLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFKNTVIIMTSNL
GSEKIQQHFGELNYGGIKEIVMDVVSQHFRPEFLNRVDETVVFHPLAQEHIKNIASIQLQRLEKRLNEKDYQLQVTDEAL
NLIAEAGFDPVYGARPLKRAIQTYIENPLAQDILSGKLRVGEVIKLKVKNEQLIATQNDDF

Sequences:
NA

Specific function: NA

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA