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The map label for this gene is yxkH [H]

Identifier: 308535317

GI number: 308535317

Start: 3117247

End: 3118068

Strand: Direct

Name: yxkH [H]

Synonym: NA

Alternate gene names: 308535317

Gene position: 3117247-3118068 (Clockwise)

Preceding gene: 197119053

Following gene: 197119072

Centisome position: 67.54

GC content: 58.39

Gene sequence:

>822_bases
ATGAAGTGCAGAATCCTTTTGCTGCTGCTCGCGGCCACCCTCATGCTAACCGCAGGCGCACACGCGGCTGGTCCCGTGAT
AAAGGCCACCCCTCCTGCCGCTACCCAGGGAGTCAACGTCCCCATCCTGCTCTACCACCGCTTCGGCCCGACCGTCGCCG
ATGGCATGACCATCAAGACCAGCGTCTTCGAATCGCACCTGAAGTACCTCAAGGACAACGGCTACACGGTGATACCGCTC
CGCAAACTGGTCGACTACTACCTGAAAAAGGGTCCGGCACCGGCGCCCAAATCGGTGGTCATCGTGGAAGACGACGCGCA
TAAGTCGGTCTACTCCGACATGCTCCCCCTGGCGAAAAAGTACAACGTCCCGGTCACCGTGTTCGTCTACCCCTCCGCCA
TTTCCAATGCCAAGTACGCGATGACCTGGGACCAGTTGCGCACCCTCCAGAAGAACGGGTTCGACATCCAGTCGCACACC
TTCTGGCATCCCAACTTCAGGCATGATAAGAAGAAGATGGCTCCGGCCGAATTCGAGAAGTCGGTGCATACACAGCTCAA
GAAATCGAAGGATCGCCTGGAATCGCAGTTGGGGACCAAGATCGACATGCTGGCCTGGCCCTTCGGCATCTATGACGATT
ACCTCCTGAAGAAGGCGGCCGATGCCGGTTACATCGCCACCTTCACCATCGAGGCTCATCACGCCACTGCCCAGGACAAG
GTGAACAAGCTCCCGCGCTACCTGCTGATCAACGCGGACCAGGGGAAAGCGTTCGCTCAGATCGTGGAAGGGAAGGCTCC
CAAGAGAAACCTCGTCTACTAG

Upstream 100 bases:
NA

Downstream 100 bases:
NA

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:
NA

Sequences:

>Translated_273_residues
MKCRILLLLLAATLMLTAGAHAAGPVIKATPPAATQGVNVPILLYHRFGPTVADGMTIKTSVFESHLKYLKDNGYTVIPL
RKLVDYYLKKGPAPAPKSVVIVEDDAHKSVYSDMLPLAKKYNVPVTVFVYPSAISNAKYAMTWDQLRTLQKNGFDIQSHT
FWHPNFRHDKKKMAPAEFEKSVHTQLKKSKDRLESQLGTKIDMLAWPFGIYDDYLLKKAADAGYIATFTIEAHHATAQDK
VNKLPRYLLINADQGKAFAQIVEGKAPKRNLVY
>Mature_273_residues
MKCRILLLLLAATLMLTAGAHAAGPVIKATPPAATQGVNVPILLYHRFGPTVADGMTIKTSVFESHLKYLKDNGYTVIPL
RKLVDYYLKKGPAPAPKSVVIVEDDAHKSVYSDMLPLAKKYNVPVTVFVYPSAISNAKYAMTWDQLRTLQKNGFDIQSHT
FWHPNFRHDKKKMAPAEFEKSVHTQLKKSKDRLESQLGTKIDMLAWPFGIYDDYLLKKAADAGYIATFTIEAHHATAQDK
VNKLPRYLLINADQGKAFAQIVEGKAPKRNLVY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=219, Percent_Identity=25.1141552511416, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 30527; Mature: 30527

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCRILLLLLAATLMLTAGAHAAGPVIKATPPAATQGVNVPILLYHRFGPTVADGMTIKT
CCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHCCEEEHH
SVFESHLKYLKDNGYTVIPLRKLVDYYLKKGPAPAPKSVVIVEDDAHKSVYSDMLPLAKK
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
YNVPVTVFVYPSAISNAKYAMTWDQLRTLQKNGFDIQSHTFWHPNFRHDKKKMAPAEFEK
CCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCHHHHHH
SVHTQLKKSKDRLESQLGTKIDMLAWPFGIYDDYLLKKAADAGYIATFTIEAHHATAQDK
HHHHHHHHHHHHHHHHHCCEEHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCHHHHH
VNKLPRYLLINADQGKAFAQIVEGKAPKRNLVY
HHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKCRILLLLLAATLMLTAGAHAAGPVIKATPPAATQGVNVPILLYHRFGPTVADGMTIKT
CCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCCCCHHCCEEEHH
SVFESHLKYLKDNGYTVIPLRKLVDYYLKKGPAPAPKSVVIVEDDAHKSVYSDMLPLAKK
HHHHHHHHHHHCCCEEEEEHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHH
YNVPVTVFVYPSAISNAKYAMTWDQLRTLQKNGFDIQSHTFWHPNFRHDKKKMAPAEFEK
CCCCEEEEEECCCCCCCEEEEEHHHHHHHHHCCCCCCCCEEECCCCCCCHHHCCHHHHHH
SVHTQLKKSKDRLESQLGTKIDMLAWPFGIYDDYLLKKAADAGYIATFTIEAHHATAQDK
HHHHHHHHHHHHHHHHHCCEEHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEECCCHHHHH
VNKLPRYLLINADQGKAFAQIVEGKAPKRNLVY
HHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]