| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is pilV-1
Identifier: 308535248
GI number: 308535248
Start: 1789714
End: 1790136
Strand: Direct
Name: pilV-1
Synonym: NA
Alternate gene names: NA
Gene position: 1789714-1790136 (Clockwise)
Preceding gene: 197117928
Following gene: 197117930
Centisome position: 38.78
GC content: 58.87
Gene sequence:
>423_bases ATGAATGCAGGAGCGCCAATATCACGGTCAAATAGCCTCGGCTTCACCTTGATAGAGGTGCTGATGGCGATGTCGGTGCT CACTGTCGGGCTCCTTGGGCTATTGCAGTCGCTGCAGCTGGGCTACCGGCAAAACCTGCGCGACCGGATGCGGAATGAGG CTGTCCAGGTCGCCGAGGAGCAGATGCACGATCTGCGCAGGATCCCTTTCGATGAGATCGTCGGCTTCAAGAGGGATATC CCGAAAAAGATCGGAGGTCGGGAGATGCCGTTCGAGGCGGCGGGAACGGTAGATGACATCGGATCCACCGGTTCCACGGC GCGCCCCGCCAAGAAGCTGAGGGTGACGGTTTCGTGGACAGTCCACGGGGAGCGCTTCAACCACGAGATTTTCACAGTGA GGACCAGGAGATCCGATGAGTAA
Upstream 100 bases:
NA
Downstream 100 bases:
NA
Product: type IV pilus assembly protein PilV
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 140; Mature: 140
Protein sequence:
NA
Sequences:
>Translated_140_residues MNAGAPISRSNSLGFTLIEVLMAMSVLTVGLLGLLQSLQLGYRQNLRDRMRNEAVQVAEEQMHDLRRIPFDEIVGFKRDI PKKIGGREMPFEAAGTVDDIGSTGSTARPAKKLRVTVSWTVHGERFNHEIFTVRTRRSDE >Mature_140_residues MNAGAPISRSNSLGFTLIEVLMAMSVLTVGLLGLLQSLQLGYRQNLRDRMRNEAVQVAEEQMHDLRRIPFDEIVGFKRDI PKKIGGREMPFEAAGTVDDIGSTGSTARPAKKLRVTVSWTVHGERFNHEIFTVRTRRSDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15711; Mature: 15711
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAGAPISRSNSLGFTLIEVLMAMSVLTVGLLGLLQSLQLGYRQNLRDRMRNEAVQVAEE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMHDLRRIPFDEIVGFKRDIPKKIGGREMPFEAAGTVDDIGSTGSTARPAKKLRVTVSWT HHHHHHCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHEEEEEEEE VHGERFNHEIFTVRTRRSDE EECCCCCCEEEEEECCCCCC >Mature Secondary Structure MNAGAPISRSNSLGFTLIEVLMAMSVLTVGLLGLLQSLQLGYRQNLRDRMRNEAVQVAEE CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QMHDLRRIPFDEIVGFKRDIPKKIGGREMPFEAAGTVDDIGSTGSTARPAKKLRVTVSWT HHHHHHCCCHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHCCCCCCCCCCHHHEEEEEEEE VHGERFNHEIFTVRTRRSDE EECCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA