| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheW-3 [H]
Identifier: 197119526
GI number: 197119526
Start: 3640958
End: 3641452
Strand: Direct
Name: cheW-3 [H]
Synonym: Gbem_3155
Alternate gene names: 197119526
Gene position: 3640958-3641452 (Clockwise)
Preceding gene: 197119518
Following gene: 197119532
Centisome position: 78.89
GC content: 59.39
Gene sequence:
>495_bases ATGGCAGTCGAGACTATCACGGAGACTACACAGTATCTGACGTTCAAACTGGAGGACGAGCTCTTCGCACTCGACATCGG GAAGGTGCGTGAAGTGCTCGATTTCACCACCATCACCAAGGTGCCCCAGACGCCGGACTACATGCGCGGTGTCATCAACC TGCGCGGCAGCGTGGTGCCGGTAGTGGACCTGCGCTTGAAGTTCGGGATGGTGATGGCGGAGCAGACGGTAAACACCTGC GTCATCATCGTCGAGGTCGAGCTGGAAGGGGAGCGTGTGGTGATGGGCGCCATGGCAGATGCGGTCCAGGAAGTGCTCGA TCTCGAGCCGGACCAGATCGAGCCGCCGCCGCGCATCGGCACGAAGCTCAATACCGAGTTCATCAAGGGGATGGGGAAAC ACAACGACCAGTTCATCATCATCCTGGACATCGACAAGGTGTTCACCTCCAGCGAGCTGGAACTGGCGCGCGAAGTGGAA GGCGCCGCAGCTTAA
Upstream 100 bases:
>100_bases TTTTTTCTGTATCTGTCGATACTTTATACAGAAAAGAACCACCGGGCTGTCGACCGGCCCCAAGTCCTATAGCATCAATC CCTGAGAGAGGAGAACAACT
Downstream 100 bases:
>100_bases GCGCCAAACACAGCGTCAGCAACCAAAAGGCAGCCGGGTCATGCACCCAGGCTGCCTTTTTTGCGTCTGCCTGCCTCACT GGTAAAGGGGGCGGTGCTAA
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MAVETITETTQYLTFKLEDELFALDIGKVREVLDFTTITKVPQTPDYMRGVINLRGSVVPVVDLRLKFGMVMAEQTVNTC VIIVEVELEGERVVMGAMADAVQEVLDLEPDQIEPPPRIGTKLNTEFIKGMGKHNDQFIIILDIDKVFTSSELELAREVE GAAA
Sequences:
>Translated_164_residues MAVETITETTQYLTFKLEDELFALDIGKVREVLDFTTITKVPQTPDYMRGVINLRGSVVPVVDLRLKFGMVMAEQTVNTC VIIVEVELEGERVVMGAMADAVQEVLDLEPDQIEPPPRIGTKLNTEFIKGMGKHNDQFIIILDIDKVFTSSELELAREVE GAAA >Mature_163_residues AVETITETTQYLTFKLEDELFALDIGKVREVLDFTTITKVPQTPDYMRGVINLRGSVVPVVDLRLKFGMVMAEQTVNTCV IIVEVELEGERVVMGAMADAVQEVLDLEPDQIEPPPRIGTKLNTEFIKGMGKHNDQFIIILDIDKVFTSSELELAREVEG AAA
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=145, Percent_Identity=40, Blast_Score=117, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18256; Mature: 18125
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVETITETTQYLTFKLEDELFALDIGKVREVLDFTTITKVPQTPDYMRGVINLRGSVVP CCCCHHHCCCEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE VVDLRLKFGMVMAEQTVNTCVIIVEVELEGERVVMGAMADAVQEVLDLEPDQIEPPPRIG EEEHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCC TKLNTEFIKGMGKHNDQFIIILDIDKVFTSSELELAREVEGAAA CCCCHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure AVETITETTQYLTFKLEDELFALDIGKVREVLDFTTITKVPQTPDYMRGVINLRGSVVP CCCHHHCCCEEEEEEECCCEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEE VVDLRLKFGMVMAEQTVNTCVIIVEVELEGERVVMGAMADAVQEVLDLEPDQIEPPPRIG EEEHHHHHHHHHHHCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHCCCCCCCCCCCCCC TKLNTEFIKGMGKHNDQFIIILDIDKVFTSSELELAREVEGAAA CCCCHHHHHCCCCCCCCEEEEEECCHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]