| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119470
Identifier: 197119470
GI number: 197119470
Start: 3588059
End: 3588517
Strand: Direct
Name: 197119470
Synonym: Gbem_3099
Alternate gene names: NA
Gene position: 3588059-3588517 (Clockwise)
Preceding gene: 197119466
Following gene: 197119484
Centisome position: 77.75
GC content: 61.44
Gene sequence:
>459_bases ATGGGATACCGAGATCGCAGCACTGACGACAGGTCTGGAGCATACGGCTACTGCATCATGGAAGTACGGCTCAGGAACAA GAACGCTCCGGCCGGCACGAAAGACGATCTGCGGTTAATGACCGTCGACAGCCACTGGGACACCCTGCGCTTCGTCCAGG ACAACATGGACGACTGCGTGCGCAACGTGGTGCGGCTCAAGCGCATGGAACCGGCAGCCGAGCAGCGGGTGGATGAAAGC GCGGCGCTGTTCGAGAGAAACCTGGAGCCGCTGATCTCTACGCTGGCGGCCGCCCAAGGGCAAGGGGTGATGGACAAGCT GTCGACGTCGTTGAAAAAGGCCCTCCTGCTCATGGTGATGGAGCGCTACCAGAGCGACCGGGAAAAAGCCTGCCGCGTGC TCGGCATCTCCCGCGAGAAGCTCGAAAAGGAACTGCAACTCTGCGGCGTTCCCCGCTGA
Upstream 100 bases:
>100_bases CTGACGCTATTACAGCAGGTTACAGGAAAACAACCGACTGTTGCGGTTTTGGTATGGCGGTTGAAAAGAAGAAACAAACG GCATATACGGGGGTGACACG
Downstream 100 bases:
>100_bases CGGGAACCTCCGTCGCCTAATAGTATTCTTCCTGATAAGAAGGGATCTCCGCGCACCAGCGGGGGTCCCTTTTTGCGTGT TGCAAGGCCGCATCCACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 151
Protein sequence:
>152_residues MGYRDRSTDDRSGAYGYCIMEVRLRNKNAPAGTKDDLRLMTVDSHWDTLRFVQDNMDDCVRNVVRLKRMEPAAEQRVDES AALFERNLEPLISTLAAAQGQGVMDKLSTSLKKALLLMVMERYQSDREKACRVLGISREKLEKELQLCGVPR
Sequences:
>Translated_152_residues MGYRDRSTDDRSGAYGYCIMEVRLRNKNAPAGTKDDLRLMTVDSHWDTLRFVQDNMDDCVRNVVRLKRMEPAAEQRVDES AALFERNLEPLISTLAAAQGQGVMDKLSTSLKKALLLMVMERYQSDREKACRVLGISREKLEKELQLCGVPR >Mature_151_residues GYRDRSTDDRSGAYGYCIMEVRLRNKNAPAGTKDDLRLMTVDSHWDTLRFVQDNMDDCVRNVVRLKRMEPAAEQRVDESA ALFERNLEPLISTLAAAQGQGVMDKLSTSLKKALLLMVMERYQSDREKACRVLGISREKLEKELQLCGVPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17370; Mature: 17239
Theoretical pI: Translated: 8.31; Mature: 8.31
Prosite motif: PS00148 ARGINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYRDRSTDDRSGAYGYCIMEVRLRNKNAPAGTKDDLRLMTVDSHWDTLRFVQDNMDDCV CCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHH RNVVRLKRMEPAAEQRVDESAALFERNLEPLISTLAAAQGQGVMDKLSTSLKKALLLMVM HHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ERYQSDREKACRVLGISREKLEKELQLCGVPR HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure GYRDRSTDDRSGAYGYCIMEVRLRNKNAPAGTKDDLRLMTVDSHWDTLRFVQDNMDDCV CCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEECCCHHHHHHHHCCHHHHH RNVVRLKRMEPAAEQRVDESAALFERNLEPLISTLAAAQGQGVMDKLSTSLKKALLLMVM HHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ERYQSDREKACRVLGISREKLEKELQLCGVPR HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA