| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is 197119326
Identifier: 197119326
GI number: 197119326
Start: 3421654
End: 3422592
Strand: Direct
Name: 197119326
Synonym: Gbem_2954
Alternate gene names: NA
Gene position: 3421654-3422592 (Clockwise)
Preceding gene: 197119322
Following gene: 197119327
Centisome position: 74.14
GC content: 63.79
Gene sequence:
>939_bases ATGGAAGTAGCGATACGGATCATACTGCTCTCTGGAAAGTCGGCGCTAGACCTGGCGCTTTACACCCTGTTGCCGGTGCT GGTGGTGATGATGGCGATGATGAAGCTGGTGGAGGCGCGGGGCATCCTCGCCCTGGTCGCCAAGTGGCTTCGCCCCGTGC TCAGGATCTTCGGCGTCCCCGGCGCCGGGGCGTTCGCCATGCTGCAGCTGCTTCTGGTCAGTTTCGCCGCTCCGGTCGCC ACCTTCTCCGTGATGGAGAAGGACGGGACCGCAAAGCGGGCCATCGCCGCTACGCTGGCGATGGTCCTCACCATGTCGCA GGCCAACGTGGTCTTCCCCATGGTGTCAGCGGGGCTCGACCTTGCCACCATCATGATGACCTCGCTCGCGGGGGGACTCG CGGCGGCGGCGCTCACCTATTACCTACTCACCCGTTCGCTGGGGCACGAGGGAGGAGAGCATGAAGACCACGGCGTCCCC GCCACCGCCGCAAAGAAAAGCACCGCCCTCAACCTGATGATCGTAGGCGGCCAGGAGGCGGTCCAGGTAATCCTCGGCGC CATCCCCATGCTGATACTGGCCATCTTCCTGGTGAACGTGCTTAAGGAGATAGGCGCCATCGCGCTTTTGGAAACGGCGC TGCGCCCCCTTTTCGCACTGATCGGTTTCCCCGCGGTGGCGGTGCTCCCCTTGGCCACCAAATATCTGGCCGGAGGGACC GCCATGATGGGTGTGACGCTCAACCTGGTGAAGGAAGGCGCCATCACCGTCACCGAGTTGAACCGGATGGCAGGCTTCCT CACCAACCCCTGCGACATAGTCGGCGTTGCCGTCCTCGCCTCCGCCGGTACCCGCTGCAGTTCCGTGGTGCGTCCGGCCG TCATCGGCGCCCTCTTCGGCATACTGCTGCGCGGCGTGATGCACCTCCTAATTTTTTAA
Upstream 100 bases:
>100_bases TGCTGGCAATGCTGAAAAATTTCCCGTATATTCCCAAAACTTTTATTTTAATGATGAGCTTTTCCCGGGTGCCCCAGCCC CCCTTCATCGGAGCGACTGC
Downstream 100 bases:
>100_bases CCTTCCTGCCCAACTTGCCGTTGCCGCCATCCCCTCCACGTCGCCTCCGGCGCCGCCGAGCGCAAAGCGCCACGCTTCTT CCTGCCTTGACTGAACCACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MEVAIRIILLSGKSALDLALYTLLPVLVVMMAMMKLVEARGILALVAKWLRPVLRIFGVPGAGAFAMLQLLLVSFAAPVA TFSVMEKDGTAKRAIAATLAMVLTMSQANVVFPMVSAGLDLATIMMTSLAGGLAAAALTYYLLTRSLGHEGGEHEDHGVP ATAAKKSTALNLMIVGGQEAVQVILGAIPMLILAIFLVNVLKEIGAIALLETALRPLFALIGFPAVAVLPLATKYLAGGT AMMGVTLNLVKEGAITVTELNRMAGFLTNPCDIVGVAVLASAGTRCSSVVRPAVIGALFGILLRGVMHLLIF
Sequences:
>Translated_312_residues MEVAIRIILLSGKSALDLALYTLLPVLVVMMAMMKLVEARGILALVAKWLRPVLRIFGVPGAGAFAMLQLLLVSFAAPVA TFSVMEKDGTAKRAIAATLAMVLTMSQANVVFPMVSAGLDLATIMMTSLAGGLAAAALTYYLLTRSLGHEGGEHEDHGVP ATAAKKSTALNLMIVGGQEAVQVILGAIPMLILAIFLVNVLKEIGAIALLETALRPLFALIGFPAVAVLPLATKYLAGGT AMMGVTLNLVKEGAITVTELNRMAGFLTNPCDIVGVAVLASAGTRCSSVVRPAVIGALFGILLRGVMHLLIF >Mature_312_residues MEVAIRIILLSGKSALDLALYTLLPVLVVMMAMMKLVEARGILALVAKWLRPVLRIFGVPGAGAFAMLQLLLVSFAAPVA TFSVMEKDGTAKRAIAATLAMVLTMSQANVVFPMVSAGLDLATIMMTSLAGGLAAAALTYYLLTRSLGHEGGEHEDHGVP ATAAKKSTALNLMIVGGQEAVQVILGAIPMLILAIFLVNVLKEIGAIALLETALRPLFALIGFPAVAVLPLATKYLAGGT AMMGVTLNLVKEGAITVTELNRMAGFLTNPCDIVGVAVLASAGTRCSSVVRPAVIGALFGILLRGVMHLLIF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32416; Mature: 32416
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVAIRIILLSGKSALDLALYTLLPVLVVMMAMMKLVEARGILALVAKWLRPVLRIFGVP CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC GAGAFAMLQLLLVSFAAPVATFSVMEKDGTAKRAIAATLAMVLTMSQANVVFPMVSAGLD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHH LATIMMTSLAGGLAAAALTYYLLTRSLGHEGGEHEDHGVPATAAKKSTALNLMIVGGQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEEEEECCHHH VQVILGAIPMLILAIFLVNVLKEIGAIALLETALRPLFALIGFPAVAVLPLATKYLAGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AMMGVTLNLVKEGAITVTELNRMAGFLTNPCDIVGVAVLASAGTRCSSVVRPAVIGALFG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ILLRGVMHLLIF HHHHHHHHHHCC >Mature Secondary Structure MEVAIRIILLSGKSALDLALYTLLPVLVVMMAMMKLVEARGILALVAKWLRPVLRIFGVP CCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC GAGAFAMLQLLLVSFAAPVATFSVMEKDGTAKRAIAATLAMVLTMSQANVVFPMVSAGLD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCHH LATIMMTSLAGGLAAAALTYYLLTRSLGHEGGEHEDHGVPATAAKKSTALNLMIVGGQEA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCEEEEEEECCHHH VQVILGAIPMLILAIFLVNVLKEIGAIALLETALRPLFALIGFPAVAVLPLATKYLAGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH AMMGVTLNLVKEGAITVTELNRMAGFLTNPCDIVGVAVLASAGTRCSSVVRPAVIGALFG HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ILLRGVMHLLIF HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA