| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119248
Identifier: 197119248
GI number: 197119248
Start: 3313543
End: 3314148
Strand: Direct
Name: 197119248
Synonym: Gbem_2875
Alternate gene names: NA
Gene position: 3313543-3314148 (Clockwise)
Preceding gene: 197119247
Following gene: 197119250
Centisome position: 71.8
GC content: 53.47
Gene sequence:
>606_bases TTGGCTCCCGAGGTGTCTTTAGGGAGATCGGCTGACAAGCCGAATATCCGGAAGGCGGATGAGGCGGGTGTATGGAGCAA GCTGGTTGCCTCGCTTGCCAGGATCAAGGAGAACATGGTCGAGGGGGACCCTCCGCTCTACTTGGATGCGAGGCCGCTGT TCGGTGAATACCTCTACAAGGTAACCGGTTTCGGAAATTTCTACGAAAATTGCACGGCCGCCACCACCATGATCTATCTC GACCCATCTGGGAATGTATTGCCATGCCCCTTCCTGAAGCAGTTACCTCCGGAACTGGGAAAGCTGTACAGCCACATCAA GTCAAACAACATCATGAAGAGTAGCTTTCAGAACATCTGGCATTCCGACGCATTTGAGACATTCCGGTCCTATTACGACC CTGGCAAGAACCTTTTCAAGATCAACAAGGAGTGCAAATTTTTCAAAAAGGGAACCTGCATCCCTTGCGCCGTGACCCCG TGCAATTGTGAGGCCTCCATCAGGGCGCTGAAGTCGGAGCTTGCCCCCACCCCCAAGACCGCGAATAGTTGTGAATCGGA CTTGAAGTTTGCCCCTGCATCGGCGTCTAACCCTGGCCCACCTTAA
Upstream 100 bases:
>100_bases AGGGGACTGGATGTGGCTGTGCTGACGGTGGCGACTGCCGAGAATGTGGACAGGATTCCCGAGTATGGTGGCGCGCGAGT ATGGAATAAAGGAATACAGG
Downstream 100 bases:
>100_bases CTTGTAACCTGTCAACATTCCGCGACAATGGTTCTAAGGGTCTCAGGCCGCAACCTCTTTGCCCCCCTACCTGTCCGCTC CCGGGTGCACTGTCCGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MAPEVSLGRSADKPNIRKADEAGVWSKLVASLARIKENMVEGDPPLYLDARPLFGEYLYKVTGFGNFYENCTAATTMIYL DPSGNVLPCPFLKQLPPELGKLYSHIKSNNIMKSSFQNIWHSDAFETFRSYYDPGKNLFKINKECKFFKKGTCIPCAVTP CNCEASIRALKSELAPTPKTANSCESDLKFAPASASNPGPP
Sequences:
>Translated_201_residues MAPEVSLGRSADKPNIRKADEAGVWSKLVASLARIKENMVEGDPPLYLDARPLFGEYLYKVTGFGNFYENCTAATTMIYL DPSGNVLPCPFLKQLPPELGKLYSHIKSNNIMKSSFQNIWHSDAFETFRSYYDPGKNLFKINKECKFFKKGTCIPCAVTP CNCEASIRALKSELAPTPKTANSCESDLKFAPASASNPGPP >Mature_200_residues APEVSLGRSADKPNIRKADEAGVWSKLVASLARIKENMVEGDPPLYLDARPLFGEYLYKVTGFGNFYENCTAATTMIYLD PSGNVLPCPFLKQLPPELGKLYSHIKSNNIMKSSFQNIWHSDAFETFRSYYDPGKNLFKINKECKFFKKGTCIPCAVTPC NCEASIRALKSELAPTPKTANSCESDLKFAPASASNPGPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22172; Mature: 22040
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPEVSLGRSADKPNIRKADEAGVWSKLVASLARIKENMVEGDPPLYLDARPLFGEYLYK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH VTGFGNFYENCTAATTMIYLDPSGNVLPCPFLKQLPPELGKLYSHIKSNNIMKSSFQNIW HHCCCHHHHHHHHEEEEEEECCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH HSDAFETFRSYYDPGKNLFKINKECKFFKKGTCIPCAVTPCNCEASIRALKSELAPTPKT HHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCC ANSCESDLKFAPASASNPGPP CHHHHHHCEECCCCCCCCCCC >Mature Secondary Structure APEVSLGRSADKPNIRKADEAGVWSKLVASLARIKENMVEGDPPLYLDARPLFGEYLYK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHH VTGFGNFYENCTAATTMIYLDPSGNVLPCPFLKQLPPELGKLYSHIKSNNIMKSSFQNIW HHCCCHHHHHHHHEEEEEEECCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHH HSDAFETFRSYYDPGKNLFKINKECKFFKKGTCIPCAVTPCNCEASIRALKSELAPTPKT HHHHHHHHHHHHCCCCCEEEECHHHHHHHCCCCCEEECCCCCCHHHHHHHHHHHCCCCCC ANSCESDLKFAPASASNPGPP CHHHHHHCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA