BacMap

Definition	Geobacter bemidjiensis Bem chromosome, complete genome.
Accession	NC_011146
Length	4,615,150

Click here to switch to the map view.

The map label for this gene is crt [H]

Identifier: 197119206

GI number: 197119206

Start: 3259798

End: 3260580

Strand: Reverse

Name: crt [H]

Synonym: Gbem_2833

Alternate gene names: 197119206

Gene position: 3260580-3259798 (Counterclockwise)

Preceding gene: 197119207

Following gene: 197119205

Centisome position: 70.65

GC content: 62.07

Gene sequence:

>783_bases
ATGGACGCGAAGAATATCCTGTGTGAAATAAATGAAGGGGTGGCAGTGGTGACGGTGAACCGGCCGGAAAGCCTCAACGC
CCTGAACAGCGCGGTACTGGCGGAACTGGAATGCGTCCTGTACGGGATCGAGCAGGACCAAACGGTCAAGGCGGTGATCC
TCACCGGCGCCGGCGAGAAGGCGTTCGTGGCCGGCGCCGACATCAAGGAGATGGCCCCCATGACCTCCTTCGAGGGACAC
CGGTTCGCCCAGCAGGGGCAGCGGCTGGTCCTCTTCATCGAGAAGATGACTAAGCCGGTCATCGCCGCGGTGAACGGCTA
TGCCTTAGGGGGAGGACTGGAGCTGGCGCTGGCCTGCGACGTCATCTACGCCTCCGAAAACGCCAAGTTCGGTTTTCCCG
AGGTGACTCTGGGGATCATCCCGGGCTTCGGCGGGACGCAGAACCTGGCCCGGCTCATCGGCCCGAACCGGGCCAAGGAG
CTGGTATTCAGCGGCAGGATCATTACGGCAGCCAAAGGGCTTGAGTGGGGCATCGTGAACGAACTTACGCCGCTTCCCGA
GCTGAAGGAGAAGGCCCTCGGCCTGGCCCGGGAGATGGCGAAAAACGGCTCCGTTGCCGTCGGCTACGCCAAGAACGCCA
TCGTCAACGGGCTCAACATGACCAAGGAGGACGGCTTCCGCTACGAAAGCTCCCTCTTCGGCGTCCTCTTCGCCACCGAG
GACCAGAAGGAAGGAATGGGGGCGTTCGTGGAGAAGCGAAAGGCGAAGTTCCAGGGGAAATAA

Upstream 100 bases:

>100_bases
CCCCTGCCCGCTCCTGGTGAAGATGGTGGACGCAGGCTACCTCGGCAAGAAATCCGGGAAGGGCTTTTACAACTACTAGC
ATCTCTTTGGGGGAGATCTC

Downstream 100 bases:

>100_bases
CCGGAGCGGCGCCGGGAACCGACAACGATTTTCTTACCAAGGGGGGATGATATGAACTTTGAACTGAGCCAGGACCACAA
GGTGTTGAAGGATAGCGTTC

Product: enoyl-CoA hydratase/isomerase

Products: NA

Alternate protein names: Crotonase [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MDAKNILCEINEGVAVVTVNRPESLNALNSAVLAELECVLYGIEQDQTVKAVILTGAGEKAFVAGADIKEMAPMTSFEGH
RFAQQGQRLVLFIEKMTKPVIAAVNGYALGGGLELALACDVIYASENAKFGFPEVTLGIIPGFGGTQNLARLIGPNRAKE
LVFSGRIITAAKGLEWGIVNELTPLPELKEKALGLAREMAKNGSVAVGYAKNAIVNGLNMTKEDGFRYESSLFGVLFATE
DQKEGMGAFVEKRKAKFQGK

Sequences:

>Translated_260_residues
MDAKNILCEINEGVAVVTVNRPESLNALNSAVLAELECVLYGIEQDQTVKAVILTGAGEKAFVAGADIKEMAPMTSFEGH
RFAQQGQRLVLFIEKMTKPVIAAVNGYALGGGLELALACDVIYASENAKFGFPEVTLGIIPGFGGTQNLARLIGPNRAKE
LVFSGRIITAAKGLEWGIVNELTPLPELKEKALGLAREMAKNGSVAVGYAKNAIVNGLNMTKEDGFRYESSLFGVLFATE
DQKEGMGAFVEKRKAKFQGK
>Mature_260_residues
MDAKNILCEINEGVAVVTVNRPESLNALNSAVLAELECVLYGIEQDQTVKAVILTGAGEKAFVAGADIKEMAPMTSFEGH
RFAQQGQRLVLFIEKMTKPVIAAVNGYALGGGLELALACDVIYASENAKFGFPEVTLGIIPGFGGTQNLARLIGPNRAKE
LVFSGRIITAAKGLEWGIVNELTPLPELKEKALGLAREMAKNGSVAVGYAKNAIVNGLNMTKEDGFRYESSLFGVLFATE
DQKEGMGAFVEKRKAKFQGK

Specific function: Could Possibly Oxidizes Fatty Acids Using Specific Components (By Similarity). [C]

COG id: COG1024

COG function: function code I; Enoyl-CoA hydratase/carnithine racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]

Homologues:

Organism=Homo sapiens, GI194097323, Length=253, Percent_Identity=45.0592885375494, Blast_Score=207, Evalue=6e-54,
Organism=Homo sapiens, GI4502327, Length=260, Percent_Identity=38.0769230769231, Blast_Score=133, Evalue=2e-31,
Organism=Homo sapiens, GI20127408, Length=191, Percent_Identity=38.7434554973822, Blast_Score=120, Evalue=1e-27,
Organism=Homo sapiens, GI68989263, Length=175, Percent_Identity=39.4285714285714, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI70995211, Length=253, Percent_Identity=30.8300395256917, Blast_Score=104, Evalue=9e-23,
Organism=Homo sapiens, GI150378541, Length=254, Percent_Identity=29.5275590551181, Blast_Score=103, Evalue=1e-22,
Organism=Homo sapiens, GI31542718, Length=244, Percent_Identity=27.8688524590164, Blast_Score=101, Evalue=6e-22,
Organism=Homo sapiens, GI157694516, Length=238, Percent_Identity=26.890756302521, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI213417737, Length=238, Percent_Identity=26.890756302521, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI221136756, Length=236, Percent_Identity=25, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI221136753, Length=236, Percent_Identity=25, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI116235487, Length=255, Percent_Identity=23.5294117647059, Blast_Score=78, Evalue=7e-15,
Organism=Homo sapiens, GI37594471, Length=161, Percent_Identity=32.9192546583851, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI62530384, Length=191, Percent_Identity=30.8900523560209, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI37594469, Length=161, Percent_Identity=32.9192546583851, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI221307494, Length=236, Percent_Identity=25, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI45643119, Length=208, Percent_Identity=26.4423076923077, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI260275230, Length=208, Percent_Identity=26.4423076923077, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI260274832, Length=208, Percent_Identity=26.4423076923077, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI25453481, Length=259, Percent_Identity=22.3938223938224, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI51538573, Length=259, Percent_Identity=22.3938223938224, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4757968, Length=259, Percent_Identity=22.007722007722, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI49355787, Length=259, Percent_Identity=22.007722007722, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI261878539, Length=75, Percent_Identity=50.6666666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI4757966, Length=184, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI51538581, Length=184, Percent_Identity=26.0869565217391, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI157694520, Length=199, Percent_Identity=28.1407035175879, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI1787659, Length=252, Percent_Identity=42.4603174603175, Blast_Score=187, Evalue=7e-49,
Organism=Escherichia coli, GI221142681, Length=258, Percent_Identity=36.4341085271318, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1788597, Length=254, Percent_Identity=32.2834645669291, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787660, Length=262, Percent_Identity=35.4961832061069, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1788682, Length=191, Percent_Identity=36.6492146596859, Blast_Score=124, Evalue=5e-30,
Organism=Escherichia coli, GI87082183, Length=249, Percent_Identity=29.3172690763052, Blast_Score=119, Evalue=1e-28,
Organism=Escherichia coli, GI1790281, Length=219, Percent_Identity=31.9634703196347, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25145438, Length=249, Percent_Identity=44.578313253012, Blast_Score=200, Evalue=7e-52,
Organism=Caenorhabditis elegans, GI17554946, Length=252, Percent_Identity=42.4603174603175, Blast_Score=197, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17540714, Length=204, Percent_Identity=38.2352941176471, Blast_Score=150, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17558304, Length=220, Percent_Identity=37.2727272727273, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17560910, Length=244, Percent_Identity=30.7377049180328, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI25144276, Length=225, Percent_Identity=35.1111111111111, Blast_Score=112, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17508953, Length=225, Percent_Identity=35.1111111111111, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17508951, Length=225, Percent_Identity=35.1111111111111, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17534483, Length=261, Percent_Identity=27.9693486590038, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17540306, Length=253, Percent_Identity=28.8537549407115, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17536985, Length=258, Percent_Identity=23.2558139534884, Blast_Score=90, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI25144157, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI25144160, Length=210, Percent_Identity=30.4761904761905, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17549921, Length=208, Percent_Identity=27.4038461538462, Blast_Score=82, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6320241, Length=195, Percent_Identity=27.1794871794872, Blast_Score=78, Evalue=1e-15,
Organism=Drosophila melanogaster, GI20129971, Length=248, Percent_Identity=43.9516129032258, Blast_Score=204, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24653477, Length=248, Percent_Identity=43.9516129032258, Blast_Score=204, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24653139, Length=254, Percent_Identity=38.9763779527559, Blast_Score=180, Evalue=7e-46,
Organism=Drosophila melanogaster, GI19920382, Length=250, Percent_Identity=29.6, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI21357171, Length=268, Percent_Identity=27.6119402985075, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI19922422, Length=255, Percent_Identity=24.3137254901961, Blast_Score=97, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24650670, Length=253, Percent_Identity=26.4822134387352, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19921000, Length=183, Percent_Identity=35.5191256830601, Blast_Score=87, Evalue=7e-18,
Organism=Drosophila melanogaster, GI24583077, Length=183, Percent_Identity=35.5191256830601, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI24583079, Length=183, Percent_Identity=35.5191256830601, Blast_Score=87, Evalue=8e-18,
Organism=Drosophila melanogaster, GI19921018, Length=254, Percent_Identity=29.1338582677165, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24654903, Length=226, Percent_Identity=26.1061946902655, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24583165, Length=257, Percent_Identity=28.7937743190661, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI28571730, Length=155, Percent_Identity=29.6774193548387, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28571729, Length=155, Percent_Identity=29.6774193548387, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014748
- InterPro:   IPR001753
- InterPro:   IPR018376 [H]

Pfam domain/function: PF00378 ECH [H]

EC number: =4.2.1.55 [H]

Molecular weight: Translated: 27788; Mature: 27788

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS00166 ENOYL_COA_HYDRATASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKNILCEINEGVAVVTVNRPESLNALNSAVLAELECVLYGIEQDQTVKAVILTGAGEK
CCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEECCCCE
AFVAGADIKEMAPMTSFEGHRFAQQGQRLVLFIEKMTKPVIAAVNGYALGGGLELALACD
EEEECCCHHHHCCCCCCCCCHHHHCCCEEEEEHHHHCCHHEEEECCEEECCCEEEEEEEE
VIYASENAKFGFPEVTLGIIPGFGGTQNLARLIGPNRAKELVFSGRIITAAKGLEWGIVN
EEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHEECCEEEEEECCCCCCCHH
ELTPLPELKEKALGLAREMAKNGSVAVGYAKNAIVNGLNMTKEDGFRYESSLFGVLFATE
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCCEECCCEEEEEEECC
DQKEGMGAFVEKRKAKFQGK
CCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDAKNILCEINEGVAVVTVNRPESLNALNSAVLAELECVLYGIEQDQTVKAVILTGAGEK
CCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCCEEEEEEEECCCCE
AFVAGADIKEMAPMTSFEGHRFAQQGQRLVLFIEKMTKPVIAAVNGYALGGGLELALACD
EEEECCCHHHHCCCCCCCCCHHHHCCCEEEEEHHHHCCHHEEEECCEEECCCEEEEEEEE
VIYASENAKFGFPEVTLGIIPGFGGTQNLARLIGPNRAKELVFSGRIITAAKGLEWGIVN
EEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHCCCHHHHHEECCEEEEEECCCCCCCHH
ELTPLPELKEKALGLAREMAKNGSVAVGYAKNAIVNGLNMTKEDGFRYESSLFGVLFATE
CCCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHCCCCCCCCCCCEECCCEEEEEEECC
DQKEGMGAFVEKRKAKFQGK
CCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8655474; 11466286 [H]