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The map label for this gene is etfB-7 [H]

Identifier: 197119203

GI number: 197119203

Start: 3255474

End: 3256256

Strand: Reverse

Name: etfB-7 [H]

Synonym: Gbem_2830

Alternate gene names: 197119203

Gene position: 3256256-3255474 (Counterclockwise)

Preceding gene: 197119204

Following gene: 197119202

Centisome position: 70.56

GC content: 61.69

Gene sequence:

>783_bases
ATGAAGATACTGGTATGCATCAAGCAGGTTCCTGACATGGAATCGCGGTTCAAGCTCAACAGCGAAGGTACCTGGTACGA
CGAGGCGGACCTCGCTTTCCGGATGAACGAGTACGACGAATATGCGGTGGAGCAGGCCGTTCAGTTGAAAGAACAGTTGG
GGGGCGAGCCTGAGATAACGGTCCTCTCCATGGGGCCGGACCGCGTGGTCGAGGCGCTGAAGAAGGCGCTGGCGATGGGG
GCCGACCGGGCGGTTCACGTGAAGGATGACAAGTACTACCAGAAGGACCCCTGGCAGGTCGCCTCGGTCATAGCGGGGCA
CGCTGCGGGGCAGGGGTACGACGTGGTCTTCACCGGGATGCAGTCCCAGGACCGCGGCTCCGCGCAGGTCGGGGTCACCG
TCGCCGAGTTGCTGGGCTTTGGCTGCGCCACCACCCTGGTCGGCTTTGCTTTCGACGCGGGTGTGATCACGGCGAAACGC
GAACTGGAAGGCGGCAGCAAAGGGGTTGTTAAGCTGAAGCTCCCCGCTGTAGTCACCTGCCAGCTGGGGCTCAACACCCC
CCGGTACCCGACGCTTCCCAACATCATGAAGGCGAAGAAAAAGGAAATCCTCGTCCAAGCTGTCTCGGAGCTCCTGAAGG
AAGCCGAGGTCACCGGGACCGGCGGCATGTATCCTCCCGCTAAGAGGGGAGGCGGCATCGTCATCGAGGGCGAGGTGAAC
GACCAGCTCGACAAACTGATGGGGATTCTCAAGGAAAAGACCACCGTGTTGCGTGCGGCCTGA

Upstream 100 bases:

>100_bases
CCACAGAGATTTCGGGTGTAAACGGCAAGGACGCTGCCTGAACCGCATCGACAAGCGGCGGCAAAGCCGCAGCTACAAAA
GAGTCAACAAGGAGGAGGCC

Downstream 100 bases:

>100_bases
AAGGAGAACAGCTATGAAAGCGTTGCTTATCGCGGAATACAGGCAGGGGAAACTGCTGGAGACCACCTATGAACTGCAGG
CCTTTGCCGGCCTGTTAGGC

Product: electron transfer flavoprotein subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKILVCIKQVPDMESRFKLNSEGTWYDEADLAFRMNEYDEYAVEQAVQLKEQLGGEPEITVLSMGPDRVVEALKKALAMG
ADRAVHVKDDKYYQKDPWQVASVIAGHAAGQGYDVVFTGMQSQDRGSAQVGVTVAELLGFGCATTLVGFAFDAGVITAKR
ELEGGSKGVVKLKLPAVVTCQLGLNTPRYPTLPNIMKAKKKEILVQAVSELLKEAEVTGTGGMYPPAKRGGGIVIEGEVN
DQLDKLMGILKEKTTVLRAA

Sequences:

>Translated_260_residues
MKILVCIKQVPDMESRFKLNSEGTWYDEADLAFRMNEYDEYAVEQAVQLKEQLGGEPEITVLSMGPDRVVEALKKALAMG
ADRAVHVKDDKYYQKDPWQVASVIAGHAAGQGYDVVFTGMQSQDRGSAQVGVTVAELLGFGCATTLVGFAFDAGVITAKR
ELEGGSKGVVKLKLPAVVTCQLGLNTPRYPTLPNIMKAKKKEILVQAVSELLKEAEVTGTGGMYPPAKRGGGIVIEGEVN
DQLDKLMGILKEKTTVLRAA
>Mature_260_residues
MKILVCIKQVPDMESRFKLNSEGTWYDEADLAFRMNEYDEYAVEQAVQLKEQLGGEPEITVLSMGPDRVVEALKKALAMG
ADRAVHVKDDKYYQKDPWQVASVIAGHAAGQGYDVVFTGMQSQDRGSAQVGVTVAELLGFGCATTLVGFAFDAGVITAKR
ELEGGSKGVVKLKLPAVVTCQLGLNTPRYPTLPNIMKAKKKEILVQAVSELLKEAEVTGTGGMYPPAKRGGGIVIEGEVN
DQLDKLMGILKEKTTVLRAA

Specific function: The electron transfer flavoprotein of this bacterium serves as an electron acceptor specifically for trimethylamine dehydrogenase. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=207, Percent_Identity=38.6473429951691, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI62420877, Length=192, Percent_Identity=40.625, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI87081682, Length=249, Percent_Identity=32.1285140562249, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87082158, Length=244, Percent_Identity=27.0491803278689, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI2367123, Length=260, Percent_Identity=26.5384615384615, Blast_Score=69, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI25141345, Length=264, Percent_Identity=34.8484848484849, Blast_Score=118, Evalue=4e-27,
Organism=Saccharomyces cerevisiae, GI6321646, Length=205, Percent_Identity=32.1951219512195, Blast_Score=103, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24651147, Length=198, Percent_Identity=37.8787878787879, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24651145, Length=198, Percent_Identity=37.8787878787879, Blast_Score=112, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 28094; Mature: 28094

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVCIKQVPDMESRFKLNSEGTWYDEADLAFRMNEYDEYAVEQAVQLKEQLGGEPEIT
CEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEE
VLSMGPDRVVEALKKALAMGADRAVHVKDDKYYQKDPWQVASVIAGHAAGQGYDVVFTGM
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
QSQDRGSAQVGVTVAELLGFGCATTLVGFAFDAGVITAKRELEGGSKGVVKLKLPAVVTC
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCEEEEECCEEEEE
QLGLNTPRYPTLPNIMKAKKKEILVQAVSELLKEAEVTGTGGMYPPAKRGGGIVIEGEVN
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
DQLDKLMGILKEKTTVLRAA
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKILVCIKQVPDMESRFKLNSEGTWYDEADLAFRMNEYDEYAVEQAVQLKEQLGGEPEIT
CEEEEEECCCCCCHHHEEECCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCEE
VLSMGPDRVVEALKKALAMGADRAVHVKDDKYYQKDPWQVASVIAGHAAGQGYDVVFTGM
EEECCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECC
QSQDRGSAQVGVTVAELLGFGCATTLVGFAFDAGVITAKRELEGGSKGVVKLKLPAVVTC
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEHHHCCCCCCCEEEEECCEEEEE
QLGLNTPRYPTLPNIMKAKKKEILVQAVSELLKEAEVTGTGGMYPPAKRGGGIVIEGEVN
EECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC
DQLDKLMGILKEKTTVLRAA
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7798207; 12567183 [H]