Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119166

Identifier: 197119166

GI number: 197119166

Start: 3220540

End: 3221700

Strand: Direct

Name: 197119166

Synonym: Gbem_2793

Alternate gene names: NA

Gene position: 3220540-3221700 (Clockwise)

Preceding gene: 197119156

Following gene: 197119167

Centisome position: 69.78

GC content: 62.02

Gene sequence:

>1161_bases
ATGGCCGATGGCACTGCAACTACTAAACTTGCCGAAATCATCCTCAACCGCATCCGCACCAGCGGGGATATAACTTTCGC
TTCCTTCATGGAATCAGCTCTCTACGAGCCGGACCTGGGGTACTACACCTCCGCGGGTCGCAAAGTAGGCGCGGAGGGGG
ACTTCTACACCAGCATGAACGTCCACAGCGCCTTCGGACGGCTCATCGCTCAGGAGATCTGCCGGTTCTGGGAACAACTC
GACTCCCCCGCCTCTTTCACCATCGCCGAGGCTGGCGCGGGCGGCGGCCAACTGGCCCAAGACATACTGGACGCCATCAG
CGAGGACAACCCGCGATTCTACAACGGCCTCACCTATCGCCTCATTGAGAAGGAACCTTCCCTGCAGCAGGCCCAGGCCG
CGCGCCTGTCGCGCCACGCCGACCGGCTTGCCTGGAGCTCCCCTGACGAACTCGCCTCCGGCACGCTCTCCTTCACCGGC
TGCATCATCTCCAACGAACTCTTCGACGCCATGCCGGTGCACATCGTGGAACTGACCGAGGCGGGACTGCGGGAGGTCTA
CGTATCCGCCAACGCCGACGGCTTTGTCGAGAGGCTGCTCCCACCCTCCACCCCGGAGCTGGAAAAGTACCTGCGCAAAT
ACGAAGTAAGGCTCCTGCCGGGCCAGCGCGCGGAGATCAACCTGGCGGCTTCGGGCTGGATCGCCCAGGCGGCCGCCACC
CTCACCCGCGGCTTCGTGCTCACCATCGACTACGGTTTCCTCTCCGGTGAGTTGTACACGCCGCAAAGGAGAAACGGGAC
GCTTCTTTGCTACTACAAGCACTCCACCAACGAAAACCCCTACCAACTGGTGGGTGAGCAGGACATCACCACCCACATCA
ACTTCAGCCAGCTCATCGTCGACGGCGAAGAGGCCGGCCTCAAGAAGGCGTGGTACGGCGAGCAGTACCGCTTCCTCCTC
TCCGCTGGGCTCATGGAAGAGCTGATCAGGCTGGAGGCGCAGGCGAAGGACGAGCAGGAGAGCCTCAAGCACAGGCTGGC
GCTGAAGAAGCTGATGCTTCCCGAGGGGGGGATGGGCGATACCTTCAAGGTACTGATCCAGTCCAAGGGGGTCGACAACC
CGCAGCTTCTCTGCATGAGGAAATGGGGGATGGGACTGTGA

Upstream 100 bases:

>100_bases
TATATAGACATCTCTTATCTTTGTCAAAGCCGAATGGGGACGCATTCGTTGACATCAATTAGCGTTGCGTATATAAAAGT
GTGCTTCAGGAGGGCTCTCA

Downstream 100 bases:

>100_bases
CCTCGCCGCTCCCGCACAGTGAGGACTTGAAGGCGATCGTCTTCGACCTGGACGGGACGCTCTACCGGGAGGACCGGCTG
GGCGATGAGGTGAACCAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 386; Mature: 385

Protein sequence:

>386_residues
MADGTATTKLAEIILNRIRTSGDITFASFMESALYEPDLGYYTSAGRKVGAEGDFYTSMNVHSAFGRLIAQEICRFWEQL
DSPASFTIAEAGAGGGQLAQDILDAISEDNPRFYNGLTYRLIEKEPSLQQAQAARLSRHADRLAWSSPDELASGTLSFTG
CIISNELFDAMPVHIVELTEAGLREVYVSANADGFVERLLPPSTPELEKYLRKYEVRLLPGQRAEINLAASGWIAQAAAT
LTRGFVLTIDYGFLSGELYTPQRRNGTLLCYYKHSTNENPYQLVGEQDITTHINFSQLIVDGEEAGLKKAWYGEQYRFLL
SAGLMEELIRLEAQAKDEQESLKHRLALKKLMLPEGGMGDTFKVLIQSKGVDNPQLLCMRKWGMGL

Sequences:

>Translated_386_residues
MADGTATTKLAEIILNRIRTSGDITFASFMESALYEPDLGYYTSAGRKVGAEGDFYTSMNVHSAFGRLIAQEICRFWEQL
DSPASFTIAEAGAGGGQLAQDILDAISEDNPRFYNGLTYRLIEKEPSLQQAQAARLSRHADRLAWSSPDELASGTLSFTG
CIISNELFDAMPVHIVELTEAGLREVYVSANADGFVERLLPPSTPELEKYLRKYEVRLLPGQRAEINLAASGWIAQAAAT
LTRGFVLTIDYGFLSGELYTPQRRNGTLLCYYKHSTNENPYQLVGEQDITTHINFSQLIVDGEEAGLKKAWYGEQYRFLL
SAGLMEELIRLEAQAKDEQESLKHRLALKKLMLPEGGMGDTFKVLIQSKGVDNPQLLCMRKWGMGL
>Mature_385_residues
ADGTATTKLAEIILNRIRTSGDITFASFMESALYEPDLGYYTSAGRKVGAEGDFYTSMNVHSAFGRLIAQEICRFWEQLD
SPASFTIAEAGAGGGQLAQDILDAISEDNPRFYNGLTYRLIEKEPSLQQAQAARLSRHADRLAWSSPDELASGTLSFTGC
IISNELFDAMPVHIVELTEAGLREVYVSANADGFVERLLPPSTPELEKYLRKYEVRLLPGQRAEINLAASGWIAQAAATL
TRGFVLTIDYGFLSGELYTPQRRNGTLLCYYKHSTNENPYQLVGEQDITTHINFSQLIVDGEEAGLKKAWYGEQYRFLLS
AGLMEELIRLEAQAKDEQESLKHRLALKKLMLPEGGMGDTFKVLIQSKGVDNPQLLCMRKWGMGL

Specific function: Unknown

COG id: COG1565

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI21396487, Length=387, Percent_Identity=25.3229974160207, Blast_Score=86, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193211224, Length=390, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24645885, Length=317, Percent_Identity=28.391167192429, Blast_Score=96, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42863; Mature: 42732

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADGTATTKLAEIILNRIRTSGDITFASFMESALYEPDLGYYTSAGRKVGAEGDFYTSMN
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECC
VHSAFGRLIAQEICRFWEQLDSPASFTIAEAGAGGGQLAQDILDAISEDNPRFYNGLTYR
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCEEE
LIEKEPSLQQAQAARLSRHADRLAWSSPDELASGTLSFTGCIISNELFDAMPVHIVELTE
EECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEHHHHHHHHCCHHHHHHHH
AGLREVYVSANADGFVERLLPPSTPELEKYLRKYEVRLLPGQRAEINLAASGWIAQAAAT
HCHHEEEEECCCCHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHH
LTRGFVLTIDYGFLSGELYTPQRRNGTLLCYYKHSTNENPYQLVGEQDITTHINFSQLIV
HHCCEEEEEEECEECCEEECCCCCCCCEEEEEECCCCCCHHEEECCCCCEEEECHHHEEE
DGEEAGLKKAWYGEQYRFLLSAGLMEELIRLEAQAKDEQESLKHRLALKKLMLPEGGMGD
CCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
TFKVLIQSKGVDNPQLLCMRKWGMGL
HHHHHHHHCCCCCHHEEEEECCCCCC
>Mature Secondary Structure 
ADGTATTKLAEIILNRIRTSGDITFASFMESALYEPDLGYYTSAGRKVGAEGDFYTSMN
CCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECC
VHSAFGRLIAQEICRFWEQLDSPASFTIAEAGAGGGQLAQDILDAISEDNPRFYNGLTYR
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCHHCCCEEE
LIEKEPSLQQAQAARLSRHADRLAWSSPDELASGTLSFTGCIISNELFDAMPVHIVELTE
EECCCCCHHHHHHHHHHHHHHHHCCCCCHHHHCCCEEEEEEEHHHHHHHHCCHHHHHHHH
AGLREVYVSANADGFVERLLPPSTPELEKYLRKYEVRLLPGQRAEINLAASGWIAQAAAT
HCHHEEEEECCCCHHHHHCCCCCCHHHHHHHHHHEEEECCCCCCEEEEECCCHHHHHHHH
LTRGFVLTIDYGFLSGELYTPQRRNGTLLCYYKHSTNENPYQLVGEQDITTHINFSQLIV
HHCCEEEEEEECEECCEEECCCCCCCCEEEEEECCCCCCHHEEECCCCCEEEECHHHEEE
DGEEAGLKKAWYGEQYRFLLSAGLMEELIRLEAQAKDEQESLKHRLALKKLMLPEGGMGD
CCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCC
TFKVLIQSKGVDNPQLLCMRKWGMGL
HHHHHHHHCCCCCHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA