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The map label for this gene is blc [H]

Identifier: 197119159

GI number: 197119159

Start: 3214806

End: 3215324

Strand: Reverse

Name: blc [H]

Synonym: Gbem_2786

Alternate gene names: 197119159

Gene position: 3215324-3214806 (Counterclockwise)

Preceding gene: 197119160

Following gene: 197119158

Centisome position: 69.67

GC content: 47.21

Gene sequence:

>519_bases
ATGCCTATGAAAAAGTTATCGCTGTTGTTGTCTTTGCTCTTCACCGGTTGTGTGGGAGTACCTGAGAATGTGAAGCCGGT
CGATAACTTCGATATTCACAGGTACCTGGGGAAGTGGTATGAGATTGCGCGCTTGGAACATTCCTTTGAACGTGGCCTGA
CACGTGTCTCCGCTGAGTATGCGTTGCGGGAGGACGGCGGGCTGAAGATGATCAATCGCGGCTATTCAGCTCAGAAGGAC
AAGTGGAAGGAAGCCGTTGGTAAGGCGTATTTTGTCGAAGAGCTGAGCAAGGGTTACCTGAAGGTGTCATTCTTCGGACC
TTTTTACGGCTCCTATGTTGTTATGGATCTTGATCAAGACAACTATCAATATTCTCTCGTCTGTGGTCCCGACAAATCAT
ATTTATGGATTCTGTCTAGAACTCCTGCGATGCAGACAGAGGTGAGAAACCGATTGATTGCAAAAGCTGCAGCACTTGGT
TTTGACACGAGCAGGTTGATTTATGTTACAGATGACTGA

Upstream 100 bases:

>100_bases
GCTCACGCTCTTGGATGCCGATTGGAATTGAGATTAGTCACCGACAAACATCCAGAAAAGTGAATAAATAAACAGTGTAC
CGACGAGAGGGCAAGGAAGC

Downstream 100 bases:

>100_bases
TTGCTGTCATAGTTCGAGCTAGTTTGGGAGTTGTGGCGACTTGAGAGATGGTGCGATTCAAGGAGGCTGAGATTCATGGA
TAAGCACATCGAATTGAATG

Product: outer membrane lipocalin family lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPMKKLSLLLSLLFTGCVGVPENVKPVDNFDIHRYLGKWYEIARLEHSFERGLTRVSAEYALREDGGLKMINRGYSAQKD
KWKEAVGKAYFVEELSKGYLKVSFFGPFYGSYVVMDLDQDNYQYSLVCGPDKSYLWILSRTPAMQTEVRNRLIAKAAALG
FDTSRLIYVTDD

Sequences:

>Translated_172_residues
MPMKKLSLLLSLLFTGCVGVPENVKPVDNFDIHRYLGKWYEIARLEHSFERGLTRVSAEYALREDGGLKMINRGYSAQKD
KWKEAVGKAYFVEELSKGYLKVSFFGPFYGSYVVMDLDQDNYQYSLVCGPDKSYLWILSRTPAMQTEVRNRLIAKAAALG
FDTSRLIYVTDD
>Mature_171_residues
PMKKLSLLLSLLFTGCVGVPENVKPVDNFDIHRYLGKWYEIARLEHSFERGLTRVSAEYALREDGGLKMINRGYSAQKDK
WKEAVGKAYFVEELSKGYLKVSFFGPFYGSYVVMDLDQDNYQYSLVCGPDKSYLWILSRTPAMQTEVRNRLIAKAAALGF
DTSRLIYVTDD

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=151, Percent_Identity=31.7880794701987, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI1790592, Length=149, Percent_Identity=55.0335570469799, Blast_Score=181, Evalue=2e-47,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19706; Mature: 19575

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMKKLSLLLSLLFTGCVGVPENVKPVDNFDIHRYLGKWYEIARLEHSFERGLTRVSAEY
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALREDGGLKMINRGYSAQKDKWKEAVGKAYFVEELSKGYLKVSFFGPFYGSYVVMDLDQD
HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCC
NYQYSLVCGPDKSYLWILSRTPAMQTEVRNRLIAKAAALGFDTSRLIYVTDD
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC
>Mature Secondary Structure 
PMKKLSLLLSLLFTGCVGVPENVKPVDNFDIHRYLGKWYEIARLEHSFERGLTRVSAEY
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALREDGGLKMINRGYSAQKDKWKEAVGKAYFVEELSKGYLKVSFFGPFYGSYVVMDLDQD
HCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEECCC
NYQYSLVCGPDKSYLWILSRTPAMQTEVRNRLIAKAAALGFDTSRLIYVTDD
CEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]