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The map label for this gene is rsgA [H]

Identifier: 197119158

GI number: 197119158

Start: 3213663

End: 3214730

Strand: Reverse

Name: rsgA [H]

Synonym: Gbem_2785

Alternate gene names: 197119158

Gene position: 3214730-3213663 (Counterclockwise)

Preceding gene: 197119159

Following gene: 197119157

Centisome position: 69.66

GC content: 57.96

Gene sequence:

>1068_bases
ATGGATAAGCACATCGAATTGAATGGGCTTGGCTGGAACGACTGGTTTGAGCAGCAGGCGGCAGATATGGCAACGGACCA
TATTGCCCGCGTTGCTGCTGTGGACCGCGACCAGTTGTTGCTCGTGGATGAGACACATGCTTTCCGGGGAAGGGTGGCAG
GGGGTTATCTGCACCGCCATCACCTCTCCCAGGAGCTCCCCTGCGTTGGCGATTGGGTCTGTCTGGAGAAGGCGCCGGGT
GACGACGTTGGGGTGGTGCGCGCGCTGTTGGAGCGAAGGACGCTGCTGCGCAGAAAGTCCGCCGGTGACGCCATCGAGTA
CCAGATGATCGCTTCCAATCTGGACTATGTGGTGATCGTGCAGTCGTGCCATTTCGATTTCAATGTGAACCGGCTGGAGC
GCTACCTCGTTATGGTGCTGGATGGCGGGGCTGAGCCCTGCATTCTGCTAACCAAGACGGATTTGGTTGCTCCTGAGGTC
GTAGCTGCGCAGATAGCGGAAATACGTTCTGCTGGCATCACCGCGCCGATACTGACGTTGAGCAACATTACGCGGGACGG
TGTGGATGATCTGACCCGGCTGTTGCTCCCTGGGAAGACCTATTGCTTCGTCGGCTCGTCGGGGGTTGGCAAGAGCACGC
TGATCAACCAGTTGATCGGGCTGGAAAAGCTGGAAACCAAGTCAGTTAGCGAGAGCGGGGAAGGGCGGCATACCACGGTA
CGGCGGGAGCTGATACGGCTGGACTCAGGCGCGCTCGTGATCGACAACCCGGGGATGCGCGAATTCGGCATCTTGGGAGC
GGCGGAGGGCTTGGGCGTCAGCCACTCCGACATCACTACCCTGTCATCCAGCTGCCGCTTTCGGGATTGCAGCCATTCCG
GCGAGCCCGGTTGCGCTGTCCACGAGGCCGTGCAATCCGGTGCGATAAAGAGGGAGCATCTGGAGAACTACCTTAAACTC
ACCGAAGAGTCAGAGTTCCACCAGATGTCTTATGCGGAAAAGAGAAAGAAGGACCGCGATTTCGGCAAGTTCGTCAAGTC
GGTAAAAAAGGACTTAAAGTTAAAGTAG

Upstream 100 bases:

>100_bases
GTTGATTTATGTTACAGATGACTGATTGCTGTCATAGTTCGAGCTAGTTTGGGAGTTGTGGCGACTTGAGAGATGGTGCG
ATTCAAGGAGGCTGAGATTC

Downstream 100 bases:

>100_bases
TTATTTTGCAAAAGGCGTTGCACACGGATCAAATCGGAAACATCTACGGATAAAATCTGATAAACCGTAAGACTAAAATA
TGCTAGAACCCTGTCCTGAA

Product: ribosome small subunit biogenesis GTPase RsgA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDKHIELNGLGWNDWFEQQAADMATDHIARVAAVDRDQLLLVDETHAFRGRVAGGYLHRHHLSQELPCVGDWVCLEKAPG
DDVGVVRALLERRTLLRRKSAGDAIEYQMIASNLDYVVIVQSCHFDFNVNRLERYLVMVLDGGAEPCILLTKTDLVAPEV
VAAQIAEIRSAGITAPILTLSNITRDGVDDLTRLLLPGKTYCFVGSSGVGKSTLINQLIGLEKLETKSVSESGEGRHTTV
RRELIRLDSGALVIDNPGMREFGILGAAEGLGVSHSDITTLSSSCRFRDCSHSGEPGCAVHEAVQSGAIKREHLENYLKL
TEESEFHQMSYAEKRKKDRDFGKFVKSVKKDLKLK

Sequences:

>Translated_355_residues
MDKHIELNGLGWNDWFEQQAADMATDHIARVAAVDRDQLLLVDETHAFRGRVAGGYLHRHHLSQELPCVGDWVCLEKAPG
DDVGVVRALLERRTLLRRKSAGDAIEYQMIASNLDYVVIVQSCHFDFNVNRLERYLVMVLDGGAEPCILLTKTDLVAPEV
VAAQIAEIRSAGITAPILTLSNITRDGVDDLTRLLLPGKTYCFVGSSGVGKSTLINQLIGLEKLETKSVSESGEGRHTTV
RRELIRLDSGALVIDNPGMREFGILGAAEGLGVSHSDITTLSSSCRFRDCSHSGEPGCAVHEAVQSGAIKREHLENYLKL
TEESEFHQMSYAEKRKKDRDFGKFVKSVKKDLKLK
>Mature_355_residues
MDKHIELNGLGWNDWFEQQAADMATDHIARVAAVDRDQLLLVDETHAFRGRVAGGYLHRHHLSQELPCVGDWVCLEKAPG
DDVGVVRALLERRTLLRRKSAGDAIEYQMIASNLDYVVIVQSCHFDFNVNRLERYLVMVLDGGAEPCILLTKTDLVAPEV
VAAQIAEIRSAGITAPILTLSNITRDGVDDLTRLLLPGKTYCFVGSSGVGKSTLINQLIGLEKLETKSVSESGEGRHTTV
RRELIRLDSGALVIDNPGMREFGILGAAEGLGVSHSDITTLSSSCRFRDCSHSGEPGCAVHEAVQSGAIKREHLENYLKL
TEESEFHQMSYAEKRKKDRDFGKFVKSVKKDLKLK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=263, Percent_Identity=36.5019011406844, Blast_Score=141, Evalue=5e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 39236; Mature: 39236

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKHIELNGLGWNDWFEQQAADMATDHIARVAAVDRDQLLLVDETHAFRGRVAGGYLHRH
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHH
HLSQELPCVGDWVCLEKAPGDDVGVVRALLERRTLLRRKSAGDAIEYQMIASNLDYVVIV
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
QSCHFDFNVNRLERYLVMVLDGGAEPCILLTKTDLVAPEVVAAQIAEIRSAGITAPILTL
EECCCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHH
SNITRDGVDDLTRLLLPGKTYCFVGSSGVGKSTLINQLIGLEKLETKSVSESGEGRHTTV
HHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHH
RRELIRLDSGALVIDNPGMREFGILGAAEGLGVSHSDITTLSSSCRFRDCSHSGEPGCAV
HHHHHHCCCCEEEECCCCCCHHHCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
HEAVQSGAIKREHLENYLKLTEESEFHQMSYAEKRKKDRDFGKFVKSVKKDLKLK
HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDKHIELNGLGWNDWFEQQAADMATDHIARVAAVDRDQLLLVDETHAFRGRVAGGYLHRH
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHCCCCCCHHHHH
HLSQELPCVGDWVCLEKAPGDDVGVVRALLERRTLLRRKSAGDAIEYQMIASNLDYVVIV
HHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEE
QSCHFDFNVNRLERYLVMVLDGGAEPCILLTKTDLVAPEVVAAQIAEIRSAGITAPILTL
EECCCCCCHHHHEEEEEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHH
SNITRDGVDDLTRLLLPGKTYCFVGSSGVGKSTLINQLIGLEKLETKSVSESGEGRHTTV
HHCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCHHHHHHHCCCCCCCCCHHHH
RRELIRLDSGALVIDNPGMREFGILGAAEGLGVSHSDITTLSSSCRFRDCSHSGEPGCAV
HHHHHHCCCCEEEECCCCCCHHHCEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHH
HEAVQSGAIKREHLENYLKLTEESEFHQMSYAEKRKKDRDFGKFVKSVKKDLKLK
HHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA