Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197119147

Identifier: 197119147

GI number: 197119147

Start: 3199789

End: 3200280

Strand: Reverse

Name: 197119147

Synonym: Gbem_2774

Alternate gene names: NA

Gene position: 3200280-3199789 (Counterclockwise)

Preceding gene: 197119148

Following gene: 197119143

Centisome position: 69.34

GC content: 59.35

Gene sequence:

>492_bases
ATGATCGAAAAGGAAGCCGCAGCCAGATTGACCATGGACCAACTCCACTTCATCGACAGGTGCAAGCGGTTCGAGCTTAA
GGGCGCGGAGCTCTACTACCACTTCGCACGCAGTTTCGCCGACAACAAGCCGCTGTCAAGGCTTTGGAGCAAGACGGCGC
TTGAGGAAGAGAGCCACGCGCAGCAGTTCGCCATGGCGGCCAGGATGCAGGGCGTGGGGATGTCGGGGGTGAATACTGAT
CTGACCAAGGCGATGGTCAGTCTGCAGAAGCTGGAAGAGAAGGTCGACCAGCTGATGGCGTCGACCCTGTCTGAGGTGGA
GGCGCTCACCCTGGCGATCAAGCTGGAGGAGCAGATGGCGGTGCTGCACATGTCCACCATCGTGATCTTCGCCGATAGCG
AACTGGAGAAGCTCTTCCAGGCGATGATGGACCACGACAGGGAGCATGTGGAAGCGCTGCGGGAGTACCTGAAGTCGTTG
CCGCAGCCCTAA

Upstream 100 bases:

>100_bases
TGGCACGATCATGTTGCAGGATGAGGATGCTTATTCAAGTAAATCTTCCTTTGTCCGAATAGCCCTATATGCTGCAAACC
TATTGTTCCGAGGTGTTTTT

Downstream 100 bases:

>100_bases
ACGGCCCGCTGATGTCAGCTGTCGCCGGCGATCTTGCCGGGCTGGTCGCCCCTGGTACGGATGTTGTGGACATCGACGAA
GCGTCCGAACTCGGCATCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIEKEAAARLTMDQLHFIDRCKRFELKGAELYYHFARSFADNKPLSRLWSKTALEEESHAQQFAMAARMQGVGMSGVNTD
LTKAMVSLQKLEEKVDQLMASTLSEVEALTLAIKLEEQMAVLHMSTIVIFADSELEKLFQAMMDHDREHVEALREYLKSL
PQP

Sequences:

>Translated_163_residues
MIEKEAAARLTMDQLHFIDRCKRFELKGAELYYHFARSFADNKPLSRLWSKTALEEESHAQQFAMAARMQGVGMSGVNTD
LTKAMVSLQKLEEKVDQLMASTLSEVEALTLAIKLEEQMAVLHMSTIVIFADSELEKLFQAMMDHDREHVEALREYLKSL
PQP
>Mature_163_residues
MIEKEAAARLTMDQLHFIDRCKRFELKGAELYYHFARSFADNKPLSRLWSKTALEEESHAQQFAMAARMQGVGMSGVNTD
LTKAMVSLQKLEEKVDQLMASTLSEVEALTLAIKLEEQMAVLHMSTIVIFADSELEKLFQAMMDHDREHVEALREYLKSL
PQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18650; Mature: 18650

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKEAAARLTMDQLHFIDRCKRFELKGAELYYHFARSFADNKPLSRLWSKTALEEESHA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QQFAMAARMQGVGMSGVNTDLTKAMVSLQKLEEKVDQLMASTLSEVEALTLAIKLEEQMA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLHMSTIVIFADSELEKLFQAMMDHDREHVEALREYLKSLPQP
HHHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIEKEAAARLTMDQLHFIDRCKRFELKGAELYYHFARSFADNKPLSRLWSKTALEEESHA
CCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
QQFAMAARMQGVGMSGVNTDLTKAMVSLQKLEEKVDQLMASTLSEVEALTLAIKLEEQMA
HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLHMSTIVIFADSELEKLFQAMMDHDREHVEALREYLKSLPQP
HHHHHHHHEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA