| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119076
Identifier: 197119076
GI number: 197119076
Start: 3121070
End: 3121462
Strand: Reverse
Name: 197119076
Synonym: Gbem_2703
Alternate gene names: NA
Gene position: 3121462-3121070 (Counterclockwise)
Preceding gene: 197119077
Following gene: 197119075
Centisome position: 67.64
GC content: 61.32
Gene sequence:
>393_bases ATGTCCAACAACAAGAAAAACGAAATGACCTTTAAATACATTTTCCAATACGACTACAACCCCGTCTACGTGAACGGCGC CCACGGCGGCATCTCCCCGCGCGGCGAACTGGTGATGAACTTCTACCTGGAGCGCCAGCCGCTCCCGAACGCCATCACCC ACGAGATCACCCAGGCCGGCACCATCGGCCCCGAGACCGAGGTCGAGCCGTCTGATCTTACGCGGAGCCTGGTGCGCCAG GTCATCAACGGCGTGGTAGTGAACTACAACACCGCGCGCGAGCTGCACTACTGGCTGGGCGAGAAGCTGAAGGAGATGGA AGCGCTGGAGCAGGCGAGGGCTGCGGCGATTGCGGCAGCGCAGCAGGCGGCAGGTACCGGCCAGGTTCACTAA
Upstream 100 bases:
>100_bases GCCAAGATTAAGCTCGGGTTAGATTCTTGTTTGCCTGGGCCGCCGCTCCATGCTATAAAGCGCATGCAGTTTTACAATGC CCATTGAAAAGGAGAGCACC
Downstream 100 bases:
>100_bases AAAAGGGACGGCATAAAAGGGGGACAGGCTACTTTTTTCCCGAAAAAAGTAGCCTGTCCCCTTTAGAGCAAGGGGCGGGC TCTCCTTCAGGGGGGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSNNKKNEMTFKYIFQYDYNPVYVNGAHGGISPRGELVMNFYLERQPLPNAITHEITQAGTIGPETEVEPSDLTRSLVRQ VINGVVVNYNTARELHYWLGEKLKEMEALEQARAAAIAAAQQAAGTGQVH
Sequences:
>Translated_130_residues MSNNKKNEMTFKYIFQYDYNPVYVNGAHGGISPRGELVMNFYLERQPLPNAITHEITQAGTIGPETEVEPSDLTRSLVRQ VINGVVVNYNTARELHYWLGEKLKEMEALEQARAAAIAAAQQAAGTGQVH >Mature_129_residues SNNKKNEMTFKYIFQYDYNPVYVNGAHGGISPRGELVMNFYLERQPLPNAITHEITQAGTIGPETEVEPSDLTRSLVRQV INGVVVNYNTARELHYWLGEKLKEMEALEQARAAAIAAAQQAAGTGQVH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14493; Mature: 14361
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNKKNEMTFKYIFQYDYNPVYVNGAHGGISPRGELVMNFYLERQPLPNAITHEITQAG CCCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC TIGPETEVEPSDLTRSLVRQVINGVVVNYNTARELHYWLGEKLKEMEALEQARAAAIAAA CCCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAAGTGQVH HHHCCCCCCC >Mature Secondary Structure SNNKKNEMTFKYIFQYDYNPVYVNGAHGGISPRGELVMNFYLERQPLPNAITHEITQAG CCCCCCCEEEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCC TIGPETEVEPSDLTRSLVRQVINGVVVNYNTARELHYWLGEKLKEMEALEQARAAAIAAA CCCCCCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQAAGTGQVH HHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA