| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is lgt [H]
Identifier: 197119028
GI number: 197119028
Start: 3069911
End: 3070684
Strand: Reverse
Name: lgt [H]
Synonym: Gbem_2651
Alternate gene names: 197119028
Gene position: 3070684-3069911 (Counterclockwise)
Preceding gene: 197119029
Following gene: 197119022
Centisome position: 66.53
GC content: 59.69
Gene sequence:
>774_bases ATGACTTTTCCCAACATCGACCCGGTGTTTCTGCGTCTGGGACCGCTGGAGTTCCGCTGGTACGGTCTCATGTACATCAT CGGTTTCATCTCGGCCTATTTCATCATCCTGTCCGGCGTAAGGAGAAAGGGACTTTCTCTAACCAAGGACGACGTCGCGG ACCTGATCTTTACCGTGGCGGTAGGGGTCATCCTCGGCGGCCGGTTCGGGTACATCCTGTTCTACAACCTCGCCTACTAC ATCGCCAACCCACTGAAGCTCTTCGCGGTCTGGGAAGGGGGGATGTCGTTTCACGGCGGGCTTATCGGGGCGGTGCTGGC AAGCATCTTCTATATCCGCAGGCATAAGCTCCGCTTTTACCGTCTGGCCGACATCGGTTTCCTTGCAGCGCCGGTGGGGC TTGGCTGCGGCAGGATCGGGAACTTCATAAACGGCGAACTCTACGGCCGGGTGAGCGACGTCCCCTGGGCGATGATCTTT CCGGGGGGAGGGCCGCTGCCGCGCCACCCCTCGCAGCTTTACGAGGCGCTGCTCGAAGGGCCGGTCATGTTCCTCATCCT TTACGCCATCTCCCGCAAGGTGAACCGCGACGGAGTGGTGGTGTGGTCCTTCATTGCCTTGTACGGGTTGTTCAGGTTTC TGTTGGAGAACTTCAGGGAGCCCGACCAGCAGATCGGTTATCTCTTCGGGGGGCTTTCGATGGGGCAACTGTTGAGCCTG CCGATGCTGCTTGTCGGCGGACTGATGGCGCTGTACCGCCTGAGAAGGGGGTGA
Upstream 100 bases:
>100_bases CGTCGCGGCGCCTCGCCCCGCGCCTTCCCGGTCCTGCTGCGCCCATTGCCGGCGCCGGCGGGGTCGGCGTTCGATAAGAA TCAAACTTTCGGAGCTTTAA
Downstream 100 bases:
>100_bases TGCGGGGGGTGGGTCAGGAGAGCTTTTTCTTCATCTCCAGGATGTTCTCCTTGCAGTTCTTGCGGTAGCACACCGAATCC ATCAGGGTGCGGATCAGGAA
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MTFPNIDPVFLRLGPLEFRWYGLMYIIGFISAYFIILSGVRRKGLSLTKDDVADLIFTVAVGVILGGRFGYILFYNLAYY IANPLKLFAVWEGGMSFHGGLIGAVLASIFYIRRHKLRFYRLADIGFLAAPVGLGCGRIGNFINGELYGRVSDVPWAMIF PGGGPLPRHPSQLYEALLEGPVMFLILYAISRKVNRDGVVVWSFIALYGLFRFLLENFREPDQQIGYLFGGLSMGQLLSL PMLLVGGLMALYRLRRG
Sequences:
>Translated_257_residues MTFPNIDPVFLRLGPLEFRWYGLMYIIGFISAYFIILSGVRRKGLSLTKDDVADLIFTVAVGVILGGRFGYILFYNLAYY IANPLKLFAVWEGGMSFHGGLIGAVLASIFYIRRHKLRFYRLADIGFLAAPVGLGCGRIGNFINGELYGRVSDVPWAMIF PGGGPLPRHPSQLYEALLEGPVMFLILYAISRKVNRDGVVVWSFIALYGLFRFLLENFREPDQQIGYLFGGLSMGQLLSL PMLLVGGLMALYRLRRG >Mature_256_residues TFPNIDPVFLRLGPLEFRWYGLMYIIGFISAYFIILSGVRRKGLSLTKDDVADLIFTVAVGVILGGRFGYILFYNLAYYI ANPLKLFAVWEGGMSFHGGLIGAVLASIFYIRRHKLRFYRLADIGFLAAPVGLGCGRIGNFINGELYGRVSDVPWAMIFP GGGPLPRHPSQLYEALLEGPVMFLILYAISRKVNRDGVVVWSFIALYGLFRFLLENFREPDQQIGYLFGGLSMGQLLSLP MLLVGGLMALYRLRRG
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins [H]
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family [H]
Homologues:
Organism=Escherichia coli, GI1789192, Length=280, Percent_Identity=46.0714285714286, Blast_Score=230, Evalue=7e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001640 [H]
Pfam domain/function: PF01790 LGT [H]
EC number: 2.4.99.- [C]
Molecular weight: Translated: 28799; Mature: 28668
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFPNIDPVFLRLGPLEFRWYGLMYIIGFISAYFIILSGVRRKGLSLTKDDVADLIFTVA CCCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VGVILGGRFGYILFYNLAYYIANPLKLFAVWEGGMSFHGGLIGAVLASIFYIRRHKLRFY HHHHHCCHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLADIGFLAAPVGLGCGRIGNFINGELYGRVSDVPWAMIFPGGGPLPRHPSQLYEALLEG HHHHHHHHHHHHHCCHHHHCCCCCCHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHC PVMFLILYAISRKVNRDGVVVWSFIALYGLFRFLLENFREPDQQIGYLFGGLSMGQLLSL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH PMLLVGGLMALYRLRRG HHHHHHHHHHHHHHHCC >Mature Secondary Structure TFPNIDPVFLRLGPLEFRWYGLMYIIGFISAYFIILSGVRRKGLSLTKDDVADLIFTVA CCCCCCHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VGVILGGRFGYILFYNLAYYIANPLKLFAVWEGGMSFHGGLIGAVLASIFYIRRHKLRFY HHHHHCCHHHHHHHHHHHHHHHCHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH RLADIGFLAAPVGLGCGRIGNFINGELYGRVSDVPWAMIFPGGGPLPRHPSQLYEALLEG HHHHHHHHHHHHHCCHHHHCCCCCCHHEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHC PVMFLILYAISRKVNRDGVVVWSFIALYGLFRFLLENFREPDQQIGYLFGGLSMGQLLSL HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHH PMLLVGGLMALYRLRRG HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA