| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197119001
Identifier: 197119001
GI number: 197119001
Start: 3040536
End: 3040745
Strand: Reverse
Name: 197119001
Synonym: Gbem_2624
Alternate gene names: NA
Gene position: 3040745-3040536 (Counterclockwise)
Preceding gene: 197119002
Following gene: 197118998
Centisome position: 65.89
GC content: 55.71
Gene sequence:
>210_bases ATGTCAGGAAAAATCTTTTACCGGGAGAGAACGAAGATGGCGGACGGGTCCCATCAGCCACGACACGTCGTGGTGGCGGT TTCGGACCTGAACCTCAAGGTGTACGGACAGCACATACGGATGTGCGAGCTTAAGTTCATCGCGGACTCTGTGGGAGCAG AGTTGGTACATTTGCCGCGCGGGCCTAAGCACCAGGAAGAAGACGACTGA
Upstream 100 bases:
>100_bases GTGATAACAGTCTGAAAAGGCTTGGTTTGTGTGCAGCCAACGATATACAATAGAGCCGTATCCTCCAAGGGAGGAAAAAA AGGAAAGGAGGCACCCTTTC
Downstream 100 bases:
>100_bases AGGTGACTAGCTTAACCGTAAGAGGTGCAAAAATGGGGGGTGTCGGCGGACACCCCCCCATTTTTGCTACTGCGGTTCGC AATGCTCATGTGGCTGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MSGKIFYRERTKMADGSHQPRHVVVAVSDLNLKVYGQHIRMCELKFIADSVGAELVHLPRGPKHQEEDD
Sequences:
>Translated_69_residues MSGKIFYRERTKMADGSHQPRHVVVAVSDLNLKVYGQHIRMCELKFIADSVGAELVHLPRGPKHQEEDD >Mature_68_residues SGKIFYRERTKMADGSHQPRHVVVAVSDLNLKVYGQHIRMCELKFIADSVGAELVHLPRGPKHQEEDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7872; Mature: 7741
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKIFYRERTKMADGSHQPRHVVVAVSDLNLKVYGQHIRMCELKFIADSVGAELVHLPR CCCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECEEEEEEEEEECCCCCCEEEECCC GPKHQEEDD CCCCCCCCC >Mature Secondary Structure SGKIFYRERTKMADGSHQPRHVVVAVSDLNLKVYGQHIRMCELKFIADSVGAELVHLPR CCEEEEECCCCCCCCCCCCCEEEEEEECCCEEEEECEEEEEEEEEECCCCCCEEEECCC GPKHQEEDD CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA