Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is kdpA

Identifier: 197118985

GI number: 197118985

Start: 3025051

End: 3026835

Strand: Reverse

Name: kdpA

Synonym: Gbem_2608

Alternate gene names: 197118985

Gene position: 3026835-3025051 (Counterclockwise)

Preceding gene: 197118986

Following gene: 197118984

Centisome position: 65.58

GC content: 59.22

Gene sequence:

>1785_bases
ATGAACGCATATGAATGGATACAGTCGGTGGTTCTTTTCGCGGTCCTATTGTTGGCAATAAAGCCGATGGGAAGCTTTAT
GGCCAAGATCTTCCAGGGGGACAGGACGTTTCTCTCGCGGTTGTTGGTCCCCTGTGAGAGTTTTATTTACCGCGTCTGCG
GCATCGACAAGGACGAGGAAATGGGGTGGCAGCAGTACGCCTGGGCCCTGCTTCTGTTTAACCTCATCTGCGGCGTCGCC
CTCTTTTTCATACTTCTGCTCCAGGGGGTCCTTCCTCTGAATCCACAGAAGTTCCCTGCCTTTTCCTGGCATTTGGCGCT
CAACACGGCCGTCAGCTTCATGACCAACACCAACTGGCAAAATTACGGCGGCGAATCGACGGCAAGCTACTTCACCCAGA
CGTTCGGCTTTGCAGTGCACAACTTCCTATCGGCCGCCACCGGCATCGTCGTTGCGATCGCCACCATTCGCGGGTTTGTC
CGGCGCAGGGTTTCCAAGATCGGCAACTTCTACGTCGACATCGCCAGGTGCACTCTGTACCTCCTGCTCCCCGTCTCCCT
TGTCTTCGCGGTCTTCCTGGTTTCCCAGGGGGTGATCCAGAACTTCAGCGGCTATCGGACGGTGCCGCTGGTCCAGGCGA
CCAGCTACCTAAAGCCCAAACTGGATGCAACAGGTAACGCGCTGAAGGACCCCAAAGGGAACAGCATTACCGAAACCATC
CAGGTTAAGGAGGTCACCATCCCCATGGGACCGGTCGCCTCCCAGGAGGCTATCAAGGAACTGGGCACCAACGGCGGCGG
GTTCTTCAACGCCAATTCGGCGCATCCTTACGAGAATCCGACCCCGCTCGCCAATGTCGTCGAGGTCTTCCTGATGCTCC
TCATCGGCGGCAGCCTCACCTACACCTTCGGGGTGATGGCAGGCAATACGCGACAGGGGTGGGCTATTCTGGCGGTGATG
TTGGCCATCCTGGTGACGGCGGTCGGGACCCTCTACTGGGCCGAGACGAGCGGCAATCCCCTGGTCGCCAAACTCGGGGT
GCACGGAGTCAATATGGAAGGTAAGGAGACTCGCTTCGGCGTCGCCGGGACTTCCCTGTTCACTTCCGCCGCAACCGGCA
CCTCCTGCGGAGCCGTCAACGCCATGCACGATTCCATGACCCCGATAGGCGGAATGATCCCCCTGTCGCTGATCCTCCTC
TCGGAAGTGGTGGTCGGCGGGGTGGGAACCGGCCTATACACCATGATCGCCTTCGTGGTGATCTCGGTCTTCATTGCGGG
GTTGATGATCGGCCGCACTCCGGAGCTGCTCGGGAAAAAGATCGAGGTGCGCGAGATGTGGATGTCGATCATCACCGTGC
TTACTTCCGGAATACTGGTGCTGATCTTTTCGGGCCTTGCGCTTGTGGTCCCGTCCGCCGTCTCCTCTATGGCTAATCCG
GGCGCGCACGGGCTCTCGGAGGTGCTCTACGCCTTCGCCTCCATGTCCAACAATAACGGCAGCGCCTTCGCGGGGCTAAA
CGGCAACACCATCTTCTACAACGTAACCGGCGCGATTGCCATGTTCCTCGGGCGCTTCGCCCCCATTGTCGCCTCGCTTG
CCATGGCGGGGTCCCTGGCGCAGAAGAAGTTCATTCCCGCCAGCCTCGGAACTCTTCCCACGGACAAGATACCCTTCGCA
CTATGGCTGACGCTGGTGATACTCATCGTCGGTGCGCTCACCTTCTTCCCCGCCCTTTCGCTGGGGCCGATCGTCGAACA
CCTGATCATGCTGGGAGGTAAGTAA

Upstream 100 bases:

>100_bases
TTAATACCTTCAACAGGCATTTTAACACCGTCTTTAGGCGCTCGGCGATATGGTGATACTCAGCAGCGAGTTATAAAAAG
TCGCATAAGCGGAGAACATC

Downstream 100 bases:

>100_bases
CATGTCCAAACACGCACCGGAACCCATATCCATGTTCGATGCGCGGATCCTGAAGCCCGCGCTGCTGGAATCGATAAAGA
AGCTCGACCCGAGAGGGCTG

Product: potassium-transporting ATPase subunit A

Products: NA

Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain

Number of amino acids: Translated: 594; Mature: 594

Protein sequence:

>594_residues
MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA
LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV
RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI
QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM
LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL
SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP
GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA
LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK

Sequences:

>Translated_594_residues
MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA
LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV
RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI
QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM
LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL
SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP
GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA
LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK
>Mature_594_residues
MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEEMGWQQYAWALLLFNLICGVA
LFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQNYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFV
RRRVSKIGNFYVDIARCTLYLLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI
QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLTYTFGVMAGNTRQGWAILAVM
LAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFGVAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILL
SEVVVGGVGTGLYTMIAFVVISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP
GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLAQKKFIPASLGTLPTDKIPFA
LWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK

Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions

COG id: COG2060

COG function: function code P; K+-transporting ATPase, A chain

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdpA family

Homologues:

Organism=Escherichia coli, GI1786915, Length=579, Percent_Identity=49.740932642487, Blast_Score=534, Evalue=1e-153,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATKA_GEOBB (B5EH80)

Other databases:

- EMBL:   CP001124
- RefSeq:   YP_002139412.1
- GeneID:   6782605
- GenomeReviews:   CP001124_GR
- KEGG:   gbm:Gbem_2608
- HOGENOM:   HBG291815
- OMA:   YLTQMIG
- ProtClustDB:   PRK05482
- HAMAP:   MF_00275
- InterPro:   IPR004623
- PIRSF:   PIRSF001294
- TIGRFAMs:   TIGR00680

Pfam domain/function: PF03814 KdpA

EC number: =3.6.3.12

Molecular weight: Translated: 63405; Mature: 63405

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x22cb6a54)-; HASH(0x232b7888)-; HASH(0x21d61e28)-; HASH(0x232e151c)-; HASH(0x23207e4c)-; HASH(0x230ae194)-; HASH(0x20e2cb70)-; HASH(0x22ab3eb8)-; HASH(0x2255dcc4)-; HASH(0x222b097c)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
MGWQQYAWALLLFNLICGVALFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCC
NYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFVRRRVSKIGNFYVDIARCTLY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE
QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLT
EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
YTFGVMAGNTRQGWAILAVMLAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFG
HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCC
VAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILLSEVVVGGVGTGLYTMIAFVV
CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLA
CCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
QKKFIPASLGTLPTDKIPFALWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK
HHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MNAYEWIQSVVLFAVLLLAIKPMGSFMAKIFQGDRTFLSRLLVPCESFIYRVCGIDKDEE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHH
MGWQQYAWALLLFNLICGVALFFILLLQGVLPLNPQKFPAFSWHLALNTAVSFMTNTNWQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCC
NYGGESTASYFTQTFGFAVHNFLSAATGIVVAIATIRGFVRRRVSKIGNFYVDIARCTLY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLLPVSLVFAVFLVSQGVIQNFSGYRTVPLVQATSYLKPKLDATGNALKDPKGNSITETI
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEE
QVKEVTIPMGPVASQEAIKELGTNGGGFFNANSAHPYENPTPLANVVEVFLMLLIGGSLT
EEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHH
YTFGVMAGNTRQGWAILAVMLAILVTAVGTLYWAETSGNPLVAKLGVHGVNMEGKETRFG
HEEEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEECCCCCCCCCCCCCCCC
VAGTSLFTSAATGTSCGAVNAMHDSMTPIGGMIPLSLILLSEVVVGGVGTGLYTMIAFVV
CCHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ISVFIAGLMIGRTPELLGKKIEVREMWMSIITVLTSGILVLIFSGLALVVPSAVSSMANP
HHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
GAHGLSEVLYAFASMSNNNGSAFAGLNGNTIFYNVTGAIAMFLGRFAPIVASLAMAGSLA
CCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
QKKFIPASLGTLPTDKIPFALWLTLVILIVGALTFFPALSLGPIVEHLIMLGGK
HHHCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA