| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is dnaK [H]
Identifier: 197118980
GI number: 197118980
Start: 3017534
End: 3018811
Strand: Direct
Name: dnaK [H]
Synonym: Gbem_2603
Alternate gene names: 197118980
Gene position: 3017534-3018811 (Clockwise)
Preceding gene: 197118979
Following gene: 308535307
Centisome position: 65.38
GC content: 57.12
Gene sequence:
>1278_bases ATGCAGATAGTTTTTGGTATCGATTTTGGCACCACCAATTCCGCCCTCTCCATCTACCGCAATAACAAAGTCGAAGTCGT GAACGTGGACGAACTGAACGCAGGCAGCGCACTGATGCGCTCGGTACTGTACTTCACCGAGGATCAGGAGATCTTCGCCG GACAAGAGGCGATCAACACCTACATCAACGAAGGCGCGGCAGGCAGATTCATGCAGTCGATAAAGACCTTCCTTCCCAAC AGCAGCTTTGAAAGCACCGAGGTCTTTGGCAGGAAGTACGGCATCGACGATCTGGTAGCGATCATCCTGAGGAAGATCAA GAAAAGGGGCGAAGAGTACGTCGGCTGCAGCGTCGACACGGTAGTGCTGGGGCGGCCCGTGCTCTTTTCCGAGGACCCGG CGAAAGACGCACTGGCCCAAAAGCGCCTGGAGCAGGCGGGCCGCAAGGCAGGCTTCAAGCAGATCTACTTCCAGTGGGAG CCGGTGGCGGCCGCACTGGCTTACGAGGAATCGCTGGCCGCGGGCGAGGAAAAGCTCGTCTTCATCGGGGACTTCGGCGG AGGCACCTCCGACTTCACCGTCATCAAGGTGCGCGGCGGCGACTTTGCCCGCTCCGACCGCCGCAGCGACGTCCTTTCGC TGGGAGGCGTCTATACGGCCGGGGACAAGTTCGATTCTCAGATAATGTGGGAGCGGATAGCCAAGTACTTCGGCCGGGGT GTCAGATACAAAGGAATGGGAAAGGACGAACTGTTCGACATACCACTCAGCATCATCTACACCCTGTGCCAGTGGCACAG AATTCCGCTTTTGAGAGCAAGGAAAACCAGGGAACAGATCAGGCTGATCAAGCATGCAGCGACAGACAAGCAAGCCATAG AGAACCTTGAGCACCTGATCGGCGACAACTACGGCTTCTTCCTGTTCCAGTCCATAGAGAAGGCAAAATGCGAGCTCTCA GATCAAGAGCTGAGTCACGTCCGCTTCAGCGAGCGCGATCTCTGCATAGAGGAACCGGTAACCAGGCAGGCTTTCGAGGA GATGAATGGCGAGAATCTCGCTAAAATCGCGGGCTGCGTAGACGAGGTAGTGAGAGAATCCGGCGTCCCGCACAGCCAAA TCGACACCGTCTTTCTTACCGGCGGCACGTCGCGCATTCCGATGATACGCAGGCTGTTCGAGGAGCGTTTCGGCGCGGAG AAGTTGGAGAACAAGAATGCCTTTACCAGTGTCGCCCACGGATTGGGGACCAGCGTCCCGCTCTTCGTGGCATCGTGA
Upstream 100 bases:
>100_bases TCGGGACATTAGGAGAGGCCGCTTTCTGGTTCCCAAGCTGCAATTCGGGAGTCTCTGCTGCGCAGCCGCTACTTTCCACC CATCAGGAGCAGTCACACCC
Downstream 100 bases:
>100_bases CCGGGATGCCGCACTAAGCGCTATCGGATGCTGCGCGGCAGTACGCACCCGCCAGGTTCGCTCATCAACAGACCTCTCCC CCGCCAACAACTTCAAGCCA
Product: chaperone
Products: NA
Alternate protein names: HSP70; Heat shock 70 kDa protein; Heat shock protein 70 [H]
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MQIVFGIDFGTTNSALSIYRNNKVEVVNVDELNAGSALMRSVLYFTEDQEIFAGQEAINTYINEGAAGRFMQSIKTFLPN SSFESTEVFGRKYGIDDLVAIILRKIKKRGEEYVGCSVDTVVLGRPVLFSEDPAKDALAQKRLEQAGRKAGFKQIYFQWE PVAAALAYEESLAAGEEKLVFIGDFGGGTSDFTVIKVRGGDFARSDRRSDVLSLGGVYTAGDKFDSQIMWERIAKYFGRG VRYKGMGKDELFDIPLSIIYTLCQWHRIPLLRARKTREQIRLIKHAATDKQAIENLEHLIGDNYGFFLFQSIEKAKCELS DQELSHVRFSERDLCIEEPVTRQAFEEMNGENLAKIAGCVDEVVRESGVPHSQIDTVFLTGGTSRIPMIRRLFEERFGAE KLENKNAFTSVAHGLGTSVPLFVAS
Sequences:
>Translated_425_residues MQIVFGIDFGTTNSALSIYRNNKVEVVNVDELNAGSALMRSVLYFTEDQEIFAGQEAINTYINEGAAGRFMQSIKTFLPN SSFESTEVFGRKYGIDDLVAIILRKIKKRGEEYVGCSVDTVVLGRPVLFSEDPAKDALAQKRLEQAGRKAGFKQIYFQWE PVAAALAYEESLAAGEEKLVFIGDFGGGTSDFTVIKVRGGDFARSDRRSDVLSLGGVYTAGDKFDSQIMWERIAKYFGRG VRYKGMGKDELFDIPLSIIYTLCQWHRIPLLRARKTREQIRLIKHAATDKQAIENLEHLIGDNYGFFLFQSIEKAKCELS DQELSHVRFSERDLCIEEPVTRQAFEEMNGENLAKIAGCVDEVVRESGVPHSQIDTVFLTGGTSRIPMIRRLFEERFGAE KLENKNAFTSVAHGLGTSVPLFVAS >Mature_425_residues MQIVFGIDFGTTNSALSIYRNNKVEVVNVDELNAGSALMRSVLYFTEDQEIFAGQEAINTYINEGAAGRFMQSIKTFLPN SSFESTEVFGRKYGIDDLVAIILRKIKKRGEEYVGCSVDTVVLGRPVLFSEDPAKDALAQKRLEQAGRKAGFKQIYFQWE PVAAALAYEESLAAGEEKLVFIGDFGGGTSDFTVIKVRGGDFARSDRRSDVLSLGGVYTAGDKFDSQIMWERIAKYFGRG VRYKGMGKDELFDIPLSIIYTLCQWHRIPLLRARKTREQIRLIKHAATDKQAIENLEHLIGDNYGFFLFQSIEKAKCELS DQELSHVRFSERDLCIEEPVTRQAFEEMNGENLAKIAGCVDEVVRESGVPHSQIDTVFLTGGTSRIPMIRRLFEERFGAE KLENKNAFTSVAHGLGTSVPLFVAS
Specific function: Acts as a chaperone [H]
COG id: COG0443
COG function: function code O; Molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 70 family [H]
Homologues:
Organism=Homo sapiens, GI16507237, Length=442, Percent_Identity=26.4705882352941, Blast_Score=104, Evalue=1e-22, Organism=Homo sapiens, GI24234688, Length=438, Percent_Identity=24.4292237442922, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI48928056, Length=469, Percent_Identity=23.8805970149254, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI87082035, Length=460, Percent_Identity=23.4782608695652, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786196, Length=437, Percent_Identity=25.1716247139588, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1786870, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1788875, Length=275, Percent_Identity=26.9090909090909, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17534771, Length=445, Percent_Identity=26.2921348314607, Blast_Score=98, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562024, Length=438, Percent_Identity=24.2009132420091, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17568549, Length=442, Percent_Identity=26.0180995475113, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17541098, Length=435, Percent_Identity=22.0689655172414, Blast_Score=84, Evalue=1e-16, Organism=Saccharomyces cerevisiae, GI6322426, Length=437, Percent_Identity=23.3409610983982, Blast_Score=92, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6320805, Length=433, Percent_Identity=25.4041570438799, Blast_Score=87, Evalue=6e-18, Organism=Saccharomyces cerevisiae, GI6323004, Length=439, Percent_Identity=22.5512528473804, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6319314, Length=439, Percent_Identity=22.5512528473804, Blast_Score=86, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6322505, Length=438, Percent_Identity=23.5159817351598, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6319972, Length=440, Percent_Identity=23.6363636363636, Blast_Score=82, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6324120, Length=440, Percent_Identity=23.6363636363636, Blast_Score=81, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6321855, Length=431, Percent_Identity=25.5220417633411, Blast_Score=73, Evalue=8e-14, Organism=Drosophila melanogaster, GI24653595, Length=438, Percent_Identity=25.1141552511416, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24647034, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647038, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24647036, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI17737967, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571721, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI28571719, Length=437, Percent_Identity=23.1121281464531, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI24641406, Length=251, Percent_Identity=27.8884462151394, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641408, Length=251, Percent_Identity=27.8884462151394, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641402, Length=251, Percent_Identity=27.8884462151394, Blast_Score=79, Evalue=6e-15, Organism=Drosophila melanogaster, GI24641404, Length=251, Percent_Identity=27.8884462151394, Blast_Score=79, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012725 - InterPro: IPR018181 - InterPro: IPR001023 - InterPro: IPR013126 [H]
Pfam domain/function: PF00012 HSP70 [H]
EC number: NA
Molecular weight: Translated: 47578; Mature: 47578
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS01036 HSP70_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIVFGIDFGTTNSALSIYRNNKVEVVNVDELNAGSALMRSVLYFTEDQEIFAGQEAINT CEEEEEECCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH YINEGAAGRFMQSIKTFLPNSSFESTEVFGRKYGIDDLVAIILRKIKKRGEEYVGCSVDT HHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCE VVLGRPVLFSEDPAKDALAQKRLEQAGRKAGFKQIYFQWEPVAAALAYEESLAAGEEKLV EEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCEEE FIGDFGGGTSDFTVIKVRGGDFARSDRRSDVLSLGGVYTAGDKFDSQIMWERIAKYFGRG EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCC VRYKGMGKDELFDIPLSIIYTLCQWHRIPLLRARKTREQIRLIKHAATDKQAIENLEHLI CEECCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GDNYGFFLFQSIEKAKCELSDQELSHVRFSERDLCIEEPVTRQAFEEMNGENLAKIAGCV CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH DEVVRESGVPHSQIDTVFLTGGTSRIPMIRRLFEERFGAEKLENKNAFTSVAHGLGTSVP HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCCC LFVAS EEEEC >Mature Secondary Structure MQIVFGIDFGTTNSALSIYRNNKVEVVNVDELNAGSALMRSVLYFTEDQEIFAGQEAINT CEEEEEECCCCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH YINEGAAGRFMQSIKTFLPNSSFESTEVFGRKYGIDDLVAIILRKIKKRGEEYVGCSVDT HHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCCHHCCCCCCE VVLGRPVLFSEDPAKDALAQKRLEQAGRKAGFKQIYFQWEPVAAALAYEESLAAGEEKLV EEECCCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCEEE FIGDFGGGTSDFTVIKVRGGDFARSDRRSDVLSLGGVYTAGDKFDSQIMWERIAKYFGRG EEECCCCCCCCEEEEEECCCCCCCCCHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHCCC VRYKGMGKDELFDIPLSIIYTLCQWHRIPLLRARKTREQIRLIKHAATDKQAIENLEHLI CEECCCCCCHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH GDNYGFFLFQSIEKAKCELSDQELSHVRFSERDLCIEEPVTRQAFEEMNGENLAKIAGCV CCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHH DEVVRESGVPHSQIDTVFLTGGTSRIPMIRRLFEERFGAEKLENKNAFTSVAHGLGTSVP HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHCCCCCC LFVAS EEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA