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The map label for this gene is 197118975

Identifier: 197118975

GI number: 197118975

Start: 3009908

End: 3010930

Strand: Reverse

Name: 197118975

Synonym: Gbem_2598

Alternate gene names: NA

Gene position: 3010930-3009908 (Counterclockwise)

Preceding gene: 197118976

Following gene: 197118974

Centisome position: 65.24

GC content: 61.0

Gene sequence:

>1023_bases
TTGTTCAAGGAAAAACTAGATAAGAAACTCTTGGTCGGCCTCGCGATCAGCGCGCTTTGCCTGTTGTTGCTCTTCAGGAA
GATCGATTTCGGCAAGATGGCGGCGGCCTTCGCCGGAATGGACTACCGCTACCTGGCCCCCGCAATCATCCTCACCTTTG
TCAGCTACTACTTCCGAGCGCTGCGCTGGAAGTTCCTCCTGGAGCCCATCAAGAAGACCCGGCTCTCCAACCTTTTCCCT
TCCACCCTGATCGGATACATGGCGAACAACCTGCTCCCGGCCAGACTGGGCGAGCTGGTGCGCGCCTACGTCCTCGGGCG
CAAGGAGGGGATCGACACCTCCGCCGTCTTCGCCTCGCTGGTGGTGGACCGGCTCTGCGACGGCTTCACCGTACTTTTGG
TGCTGGTCGCGACCTTCTTCACCATCCGGCTTCCCGCCGGAAAGGAGGGGATGCAGCAGGGGCTTGTCACCGGCGGTTAT
GTCACCTTCATCCTCTACCTCGGGGTTTTGCTGTTCCTGGCGCTTTTAAGGAAGCGGACCGACTGGACCTTGGCGCTCGT
CACCCGGCTTCTGGCGCCTTTTTCCGCAAAAGCCTCCGAAAAGGCCGCGTCGCTTCTGGGCTCCTTCATCTCAGGCGTCC
GGATGCCGGCCGGGACGGCCGGCATGGCGGCGACGGCCGCCACTTCGTTCTTGATCTGGGGCGCTGCGATTTGGCCGATA
GATCTGCTGCTGCGTGCCTTCGGCGTTGAGCTTCCGCTGACGGCTTCCATGTTCATCATGGTGTTCCTGGTCTTTGCCGT
AATGGTGCCGGCCTCGCCCGGGTTCGTCGGGACTTATCATCTTGCCTGCGTCACGGCGCTCTCAGCCTTTGACATCGTCG
GCGAGCGCGCGCTGAGCATCGCCATAGTCATTCACGCCCTGGGCTTTTTGCCGGTGATCCCGGCCGGACTCTTCTGCCTT
TGGCGGGACAAGCTGTCCCTGAAGCAAATCGGCGAAAACAACGAATCAGGAGCGCGTACGTGA

Upstream 100 bases:

>100_bases
TGCCGGGGCATCTTGCATGATGCAGAACCGGTCGGGGCCGGCGACTGGGGCCCCCTTAAGTGCTGCAAGTAACCCATCAC
CGTCGCAGACAGGAGCCAGC

Downstream 100 bases:

>100_bases
ACATGAACGGAACCCTCAGAAGGCTCGACCCCTTTTCCATCGCGGCCTTCATCATCCCTTTGTTCATCTACCTTTTGACC
CTGGCGCCGACGGTCACCTT

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MFKEKLDKKLLVGLAISALCLLLLFRKIDFGKMAAAFAGMDYRYLAPAIILTFVSYYFRALRWKFLLEPIKKTRLSNLFP
STLIGYMANNLLPARLGELVRAYVLGRKEGIDTSAVFASLVVDRLCDGFTVLLVLVATFFTIRLPAGKEGMQQGLVTGGY
VTFILYLGVLLFLALLRKRTDWTLALVTRLLAPFSAKASEKAASLLGSFISGVRMPAGTAGMAATAATSFLIWGAAIWPI
DLLLRAFGVELPLTASMFIMVFLVFAVMVPASPGFVGTYHLACVTALSAFDIVGERALSIAIVIHALGFLPVIPAGLFCL
WRDKLSLKQIGENNESGART

Sequences:

>Translated_340_residues
MFKEKLDKKLLVGLAISALCLLLLFRKIDFGKMAAAFAGMDYRYLAPAIILTFVSYYFRALRWKFLLEPIKKTRLSNLFP
STLIGYMANNLLPARLGELVRAYVLGRKEGIDTSAVFASLVVDRLCDGFTVLLVLVATFFTIRLPAGKEGMQQGLVTGGY
VTFILYLGVLLFLALLRKRTDWTLALVTRLLAPFSAKASEKAASLLGSFISGVRMPAGTAGMAATAATSFLIWGAAIWPI
DLLLRAFGVELPLTASMFIMVFLVFAVMVPASPGFVGTYHLACVTALSAFDIVGERALSIAIVIHALGFLPVIPAGLFCL
WRDKLSLKQIGENNESGART
>Mature_340_residues
MFKEKLDKKLLVGLAISALCLLLLFRKIDFGKMAAAFAGMDYRYLAPAIILTFVSYYFRALRWKFLLEPIKKTRLSNLFP
STLIGYMANNLLPARLGELVRAYVLGRKEGIDTSAVFASLVVDRLCDGFTVLLVLVATFFTIRLPAGKEGMQQGLVTGGY
VTFILYLGVLLFLALLRKRTDWTLALVTRLLAPFSAKASEKAASLLGSFISGVRMPAGTAGMAATAATSFLIWGAAIWPI
DLLLRAFGVELPLTASMFIMVFLVFAVMVPASPGFVGTYHLACVTALSAFDIVGERALSIAIVIHALGFLPVIPAGLFCL
WRDKLSLKQIGENNESGART

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0104 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022791
- InterPro:   IPR005242 [H]

Pfam domain/function: PF03706 UPF0104 [H]

EC number: NA

Molecular weight: Translated: 37008; Mature: 37008

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKEKLDKKLLVGLAISALCLLLLFRKIDFGKMAAAFAGMDYRYLAPAIILTFVSYYFRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LRWKFLLEPIKKTRLSNLFPSTLIGYMANNLLPARLGELVRAYVLGRKEGIDTSAVFASL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VVDRLCDGFTVLLVLVATFFTIRLPAGKEGMQQGLVTGGYVTFILYLGVLLFLALLRKRT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
DWTLALVTRLLAPFSAKASEKAASLLGSFISGVRMPAGTAGMAATAATSFLIWGAAIWPI
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DLLLRAFGVELPLTASMFIMVFLVFAVMVPASPGFVGTYHLACVTALSAFDIVGERALSI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIVIHALGFLPVIPAGLFCLWRDKLSLKQIGENNESGART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFKEKLDKKLLVGLAISALCLLLLFRKIDFGKMAAAFAGMDYRYLAPAIILTFVSYYFRA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LRWKFLLEPIKKTRLSNLFPSTLIGYMANNLLPARLGELVRAYVLGRKEGIDTSAVFASL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VVDRLCDGFTVLLVLVATFFTIRLPAGKEGMQQGLVTGGYVTFILYLGVLLFLALLRKRT
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC
DWTLALVTRLLAPFSAKASEKAASLLGSFISGVRMPAGTAGMAATAATSFLIWGAAIWPI
CHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DLLLRAFGVELPLTASMFIMVFLVFAVMVPASPGFVGTYHLACVTALSAFDIVGERALSI
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AIVIHALGFLPVIPAGLFCLWRDKLSLKQIGENNESGART
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]