Click here to switch to the map view.

The map label for this gene is 197118961

Identifier: 197118961

GI number: 197118961

Start: 2993898

End: 2994740

Strand: Reverse

Name: 197118961

Synonym: Gbem_2584

Alternate gene names: NA

Gene position: 2994740-2993898 (Counterclockwise)

Preceding gene: 197118962

Following gene: 197118960

Centisome position: 64.89

GC content: 59.43

Gene sequence:

>843_bases
ATGACAGCGCCCTACCTGACCATCCTTCGCCCGTCCCAGTGGCTCAAGAACCTGATGCTGTTCTTCCCGCCGTTTCTGGG
TGGGCAATTGCTCTCCCTTGGACACGTAGCTCCGGGGATAGTCCCTTTTTTCGCCTTTTGCCTGGTCTCCAGCGCAGGGT
ACCTCTGCAACGACATCCTCGACCGGCGGCGCGACGCCTGTCACCCCCTGAAGAAGAAACGCCCCATACCATCGGGCAGG
GTGAGCGTCACCGGCGCCGGCCTTCTTTGCGCCTGCCTGCTCGCCTGCGGACTTACGCTGGGAGGGCTTGAGTCGAGGTC
TTTCCTGGCGCTTTTGTCGTGCTATCTCATCGTTACGCTTCTTTATTCCACCTGGCTCAAATCGTATCCGGTGGTCGATC
TCTTCTGCATCTCTGCCGGATTCCTGCTGAGGCTTCAGGCAGGCGGAGTGGTTTTCGGCATCACCATCTCGCCCTGGCTA
TTTTTGACCGTTTTTCTCCTCTCCATTTTTCTCAGCACGGGCAAGAGGCTATGCGAGTACCGGCTCTTGGGGGCGGACGC
CACGCAGCACCGCAAAAACCTGGGTGCGTACCCTCCCGGCTTTTTGGAAGGGACCATGTACATGACGGGAGGCGCGGTGC
TGGTCACCTATGCCATGTACACGGTCAACCGTCACACCCTGGTTTACAGTGTGCCGCTATGCTGCTTCGGGCTTTTGCGC
TACATACTGCGGATCCAGTCGGGGCATAGCGGCGACCCGACGGAATCGTTGCTGAAGGACGGCGTGCTTTTCGCGGTGGG
CACCGTCTGGATGGTGCTCGTCGCATGGAGCATCTACTGGTGA

Upstream 100 bases:

>100_bases
AAGCCGCCGGTTTCTTCCAAAAAGCATACGCGGAGGCGCCTGCCGGCTCCCATTACCGCTTGGCGGCCGGAAAGCAGGCG
TCGAGTTTGGTTAACATGAA

Downstream 100 bases:

>100_bases
AAAAGGTCTATATCGTCATCGTCAACTGGAACGGCTGGCAGGACACGGTGGATTGCGTACAGAGCCTGTTGTCGCTCAAT
TACTCACCCTGCACCGTCGT

Product: phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MTAPYLTILRPSQWLKNLMLFFPPFLGGQLLSLGHVAPGIVPFFAFCLVSSAGYLCNDILDRRRDACHPLKKKRPIPSGR
VSVTGAGLLCACLLACGLTLGGLESRSFLALLSCYLIVTLLYSTWLKSYPVVDLFCISAGFLLRLQAGGVVFGITISPWL
FLTVFLLSIFLSTGKRLCEYRLLGADATQHRKNLGAYPPGFLEGTMYMTGGAVLVTYAMYTVNRHTLVYSVPLCCFGLLR
YILRIQSGHSGDPTESLLKDGVLFAVGTVWMVLVAWSIYW

Sequences:

>Translated_280_residues
MTAPYLTILRPSQWLKNLMLFFPPFLGGQLLSLGHVAPGIVPFFAFCLVSSAGYLCNDILDRRRDACHPLKKKRPIPSGR
VSVTGAGLLCACLLACGLTLGGLESRSFLALLSCYLIVTLLYSTWLKSYPVVDLFCISAGFLLRLQAGGVVFGITISPWL
FLTVFLLSIFLSTGKRLCEYRLLGADATQHRKNLGAYPPGFLEGTMYMTGGAVLVTYAMYTVNRHTLVYSVPLCCFGLLR
YILRIQSGHSGDPTESLLKDGVLFAVGTVWMVLVAWSIYW
>Mature_279_residues
TAPYLTILRPSQWLKNLMLFFPPFLGGQLLSLGHVAPGIVPFFAFCLVSSAGYLCNDILDRRRDACHPLKKKRPIPSGRV
SVTGAGLLCACLLACGLTLGGLESRSFLALLSCYLIVTLLYSTWLKSYPVVDLFCISAGFLLRLQAGGVVFGITISPWLF
LTVFLLSIFLSTGKRLCEYRLLGADATQHRKNLGAYPPGFLEGTMYMTGGAVLVTYAMYTVNRHTLVYSVPLCCFGLLRY
ILRIQSGHSGDPTESLLKDGVLFAVGTVWMVLVAWSIYW

Specific function: Possible permease/transporter [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: NA

Molecular weight: Translated: 30798; Mature: 30667

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAPYLTILRPSQWLKNLMLFFPPFLGGQLLSLGHVAPGIVPFFAFCLVSSAGYLCNDIL
CCCCCEEEECHHHHHHHHHHHHCCHHCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
DRRRDACHPLKKKRPIPSGRVSVTGAGLLCACLLACGLTLGGLESRSFLALLSCYLIVTL
HHHHHHCCCHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LYSTWLKSYPVVDLFCISAGFLLRLQAGGVVFGITISPWLFLTVFLLSIFLSTGKRLCEY
HHHHHHHHCCHHHHHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RLLGADATQHRKNLGAYPPGFLEGTMYMTGGAVLVTYAMYTVNRHTLVYSVPLCCFGLLR
HHHCCCHHHHHHHCCCCCCCHHCCCEEEECCHHHHHHHHHHHCCCHHEEEHHHHHHHHHH
YILRIQSGHSGDPTESLLKDGVLFAVGTVWMVLVAWSIYW
HHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAPYLTILRPSQWLKNLMLFFPPFLGGQLLSLGHVAPGIVPFFAFCLVSSAGYLCNDIL
CCCCEEEECHHHHHHHHHHHHCCHHCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHH
DRRRDACHPLKKKRPIPSGRVSVTGAGLLCACLLACGLTLGGLESRSFLALLSCYLIVTL
HHHHHHCCCHHHCCCCCCCCEEECHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
LYSTWLKSYPVVDLFCISAGFLLRLQAGGVVFGITISPWLFLTVFLLSIFLSTGKRLCEY
HHHHHHHHCCHHHHHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH
RLLGADATQHRKNLGAYPPGFLEGTMYMTGGAVLVTYAMYTVNRHTLVYSVPLCCFGLLR
HHHCCCHHHHHHHCCCCCCCHHCCCEEEECCHHHHHHHHHHHCCCHHEEEHHHHHHHHHH
YILRIQSGHSGDPTESLLKDGVLFAVGTVWMVLVAWSIYW
HHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]