| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118960
Identifier: 197118960
GI number: 197118960
Start: 2992909
End: 2993901
Strand: Reverse
Name: 197118960
Synonym: Gbem_2583
Alternate gene names: NA
Gene position: 2993901-2992909 (Counterclockwise)
Preceding gene: 197118961
Following gene: 197118959
Centisome position: 64.87
GC content: 60.62
Gene sequence:
>993_bases GTGAAAAAGGTCTATATCGTCATCGTCAACTGGAACGGCTGGCAGGACACGGTGGATTGCGTACAGAGCCTGTTGTCGCT CAATTACTCACCCTGCACCGTCGTTATCTGCGACAATGGCTCCAAGGACGAGTCGCTGCACAAGCTGCGTGACTGGATGG AAGAGCGGGAGATCGAGTGGGCCGAATACACGGCCGCCGAGGCCGAGACCGGCGGGGTCCCCTCCTGGGACTATCCCTTC GTCCTGATCAGAAACGGCGAGAACTTGGGCTTTGCCGGCGGCAACAACGTGGCGCTCCGTTACGCCCTGGCCCGCGACGA CTTCGGTTACGCCTGGCTTTTGAACAACGACACCGTGGTGGAGCCGGACGCGCTCGACGCCCTGGTGCGGCGCATGCAGG AAGAGCCATCGGCTGGGATGTGCGGCTCCACAGTGCGCTATTACGACCGAAGGTATAAGGTGCAGGCCTACGGCGGAGGC CATTACTGCAGTTGGGTAGGGCTTCCCTGGCATTACGGCCGTTTCGTCCCCCCCTGGTTCAAGGCGGACCCGGCCGCGGC CGAGCGTTCCCTGAACTACGTCGAGGGGGCGTCGCTTTTGGTGTCGAGGGAGTTTATTGCGGAAATCGGGCTTATGTGCG AGGATTATTTCCTGTATTTCGAGGAGGCCGACTGGGCCAACCGGGCCCGGAGGCGTTTCACCCTTGCCTACGCATCGAAG AGCGTTGTCTACCACAAGGTCGGAAGGAGCATCGGCACTCGCAGCAATCCCCGGAAGAAAAGCTATACCTGCGACTATTT CAACGTCCGCAACCGCATCCTATTCACCCGGCGCTATTTCCCCAGGGCGCTTCCGACCGTCTACCTGGTGCTTCTCTGGG CGATGCTGCTGCGGCTGCTGCTCTTGAAATTCGATAGGGCTGTGATGATCTACAAGCTTCTCTTTGGAGAAGGGACCGGC GGTCTCCCGTCCGCCCGTGAGCCGAGGCGCTGA
Upstream 100 bases:
>100_bases CGGGGCATAGCGGCGACCCGACGGAATCGTTGCTGAAGGACGGCGTGCTTTTCGCGGTGGGCACCGTCTGGATGGTGCTC GTCGCATGGAGCATCTACTG
Downstream 100 bases:
>100_bases CCCAGTGGCGCGCATCTCCGTCATCACGGTGGTCCGTAACGGCGCCGAGTGTCTTGAAGAGACCATGCTCAGCGTACTGG AGCAGAAGACGCAGCGGGAT
Product: glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase Group 2 Family; Rhamnosyl Transferase; Rhamnosyltransferase; Rhamnosyl Transferase Related Protein; Glycosyl Transferase GT2 Family Protein; Glycoside Hydrolase Family 2 Protein; Bifunctional SAM-Dependent Methyltransferase Type; Rhamnosyl Transferase RfbQ; Capsule-Related Glycosyltransferase; B-Glycosyltransferase; Glycosyl Transferase Protein; Glycosyltransferase/Rhamnosyltransferase
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKKVYIVIVNWNGWQDTVDCVQSLLSLNYSPCTVVICDNGSKDESLHKLRDWMEEREIEWAEYTAAEAETGGVPSWDYPF VLIRNGENLGFAGGNNVALRYALARDDFGYAWLLNNDTVVEPDALDALVRRMQEEPSAGMCGSTVRYYDRRYKVQAYGGG HYCSWVGLPWHYGRFVPPWFKADPAAAERSLNYVEGASLLVSREFIAEIGLMCEDYFLYFEEADWANRARRRFTLAYASK SVVYHKVGRSIGTRSNPRKKSYTCDYFNVRNRILFTRRYFPRALPTVYLVLLWAMLLRLLLLKFDRAVMIYKLLFGEGTG GLPSAREPRR
Sequences:
>Translated_330_residues MKKVYIVIVNWNGWQDTVDCVQSLLSLNYSPCTVVICDNGSKDESLHKLRDWMEEREIEWAEYTAAEAETGGVPSWDYPF VLIRNGENLGFAGGNNVALRYALARDDFGYAWLLNNDTVVEPDALDALVRRMQEEPSAGMCGSTVRYYDRRYKVQAYGGG HYCSWVGLPWHYGRFVPPWFKADPAAAERSLNYVEGASLLVSREFIAEIGLMCEDYFLYFEEADWANRARRRFTLAYASK SVVYHKVGRSIGTRSNPRKKSYTCDYFNVRNRILFTRRYFPRALPTVYLVLLWAMLLRLLLLKFDRAVMIYKLLFGEGTG GLPSAREPRR >Mature_330_residues MKKVYIVIVNWNGWQDTVDCVQSLLSLNYSPCTVVICDNGSKDESLHKLRDWMEEREIEWAEYTAAEAETGGVPSWDYPF VLIRNGENLGFAGGNNVALRYALARDDFGYAWLLNNDTVVEPDALDALVRRMQEEPSAGMCGSTVRYYDRRYKVQAYGGG HYCSWVGLPWHYGRFVPPWFKADPAAAERSLNYVEGASLLVSREFIAEIGLMCEDYFLYFEEADWANRARRRFTLAYASK SVVYHKVGRSIGTRSNPRKKSYTCDYFNVRNRILFTRRYFPRALPTVYLVLLWAMLLRLLLLKFDRAVMIYKLLFGEGTG GLPSAREPRR
Specific function: Unknown
COG id: COG1216
COG function: function code R; Predicted glycosyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38078; Mature: 38078
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKVYIVIVNWNGWQDTVDCVQSLLSLNYSPCTVVICDNGSKDESLHKLRDWMEEREIEW CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCH AEYTAAEAETGGVPSWDYPFVLIRNGENLGFAGGNNVALRYALARDDFGYAWLLNNDTVV HHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEECCCCCEEEEECCCCEE EPDALDALVRRMQEEPSAGMCGSTVRYYDRRYKVQAYGGGHYCSWVGLPWHYGRFVPPWF CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCC KADPAAAERSLNYVEGASLLVSREFIAEIGLMCEDYFLYFEEADWANRARRRFTLAYASK CCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHEEEEEEHHH SVVYHKVGRSIGTRSNPRKKSYTCDYFNVRNRILFTRRYFPRALPTVYLVLLWAMLLRLL HHHHHHHHHHHCCCCCCCCCCEEECHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH LLKFDRAVMIYKLLFGEGTGGLPSAREPRR HHHHCCHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKKVYIVIVNWNGWQDTVDCVQSLLSLNYSPCTVVICDNGSKDESLHKLRDWMEEREIEW CCEEEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCH AEYTAAEAETGGVPSWDYPFVLIRNGENLGFAGGNNVALRYALARDDFGYAWLLNNDTVV HHHHHCCCCCCCCCCCCCCEEEEECCCEECCCCCCCEEEEEEEECCCCCEEEEECCCCEE EPDALDALVRRMQEEPSAGMCGSTVRYYDRRYKVQAYGGGHYCSWVGLPWHYGRFVPPWF CCHHHHHHHHHHHCCCCCCCCCCHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCC KADPAAAERSLNYVEGASLLVSREFIAEIGLMCEDYFLYFEEADWANRARRRFTLAYASK CCCHHHHHHCCCHHCCHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHEEEEEEHHH SVVYHKVGRSIGTRSNPRKKSYTCDYFNVRNRILFTRRYFPRALPTVYLVLLWAMLLRLL HHHHHHHHHHHCCCCCCCCCCEEECHHHCCCEEEEEHHHCCHHHHHHHHHHHHHHHHHHH LLKFDRAVMIYKLLFGEGTGGLPSAREPRR HHHHCCHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA