Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is wcaE [C]

Identifier: 197118959

GI number: 197118959

Start: 2992173

End: 2992904

Strand: Reverse

Name: wcaE [C]

Synonym: Gbem_2582

Alternate gene names: 197118959

Gene position: 2992904-2992173 (Counterclockwise)

Preceding gene: 197118960

Following gene: 197118958

Centisome position: 64.85

GC content: 57.79

Gene sequence:

>732_bases
GTGGCGCGCATCTCCGTCATCACGGTGGTCCGTAACGGCGCCGAGTGTCTTGAAGAGACCATGCTCAGCGTACTGGAGCA
GAAGACGCAGCGGGATTTGGAGTACATCGTCATCGATGGCGCTTCTACCGACGGCAGCGTCGATATCATCCGACGCCACG
CCGGTCGGCTCCATTACTGGGTCAGCGAGCCGGATGCCGGAATCTACCACGCGATGAACAAGGGGTGGGAGGCTGCAGAC
GACGAAAGCTTTGTTCTTTTCATGGGAGCCGGCGACCGGGTCCTTTCACTGCCAGGGGACGAGGAGTTGGAGCAGGGGGA
TGTAGTGTACGGCGACGTCTATATGGGGGAGCGCTGCCTTTTCAGGTCGCGTGCGGATTTTCACCTGAGGCTCTACAACT
CCCTGCATCATCAGGCTCTTTTGGTAAAGAGGCTACTGCATCCAGATGCGCCGTTTGACACCTCCTTTGGGACCTATGCG
GATTTCGATTTCAACCAGAGACTGTTGAAGGCAAAGGTATGCTTCGTGCGCTCGCCGCATTTTCTGGCCCACGCGCGCCC
GGGGGGGGTGAGCGATCAACAACGGTTCACCGAGTCCCTGAGGGTGATACGCAAGAACTTCGGGGTTTTCTGGGCGTTGG
CGGCTCTGACGGGGTATTTGGCGATGAAGTCGCTTCCCATCTTCAAGAGGCTGCGCCCACTTCACAAGGGATCTTTTAAG
GATGTCAGATGA

Upstream 100 bases:

>100_bases
CTGCTCTTGAAATTCGATAGGGCTGTGATGATCTACAAGCTTCTCTTTGGAGAAGGGACCGGCGGTCTCCCGTCCGCCCG
TGAGCCGAGGCGCTGACCCA

Downstream 100 bases:

>100_bases
ACGGTGAACCGACCAAGGCAGACGGCGTCAAGTGGGACAAGGTGATGCGGCCGCGCAGCGACTGGTTCGACATCCATCCC
GGCGAGATCTGGAGATACAG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 242

Protein sequence:

>243_residues
MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAAD
DESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYA
DFDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK
DVR

Sequences:

>Translated_243_residues
MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAAD
DESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYA
DFDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK
DVR
>Mature_242_residues
ARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAADD
ESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYAD
FDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFKD
VR

Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788368, Length=231, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 27635; Mature: 27504

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYW
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCEEEE
VSEPDAGIYHAMNKGWEAADDESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCL
ECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHH
FRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYADFDFNQRLLKAKVCFVRSPH
HCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCC
FLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
DVR
CCC
>Mature Secondary Structure 
ARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYW
CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCEEEE
VSEPDAGIYHAMNKGWEAADDESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCL
ECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHH
FRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYADFDFNQRLLKAKVCFVRSPH
HCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCC
FLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK
CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC
DVR
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]