| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is wcaE [C]
Identifier: 197118959
GI number: 197118959
Start: 2992173
End: 2992904
Strand: Reverse
Name: wcaE [C]
Synonym: Gbem_2582
Alternate gene names: 197118959
Gene position: 2992904-2992173 (Counterclockwise)
Preceding gene: 197118960
Following gene: 197118958
Centisome position: 64.85
GC content: 57.79
Gene sequence:
>732_bases GTGGCGCGCATCTCCGTCATCACGGTGGTCCGTAACGGCGCCGAGTGTCTTGAAGAGACCATGCTCAGCGTACTGGAGCA GAAGACGCAGCGGGATTTGGAGTACATCGTCATCGATGGCGCTTCTACCGACGGCAGCGTCGATATCATCCGACGCCACG CCGGTCGGCTCCATTACTGGGTCAGCGAGCCGGATGCCGGAATCTACCACGCGATGAACAAGGGGTGGGAGGCTGCAGAC GACGAAAGCTTTGTTCTTTTCATGGGAGCCGGCGACCGGGTCCTTTCACTGCCAGGGGACGAGGAGTTGGAGCAGGGGGA TGTAGTGTACGGCGACGTCTATATGGGGGAGCGCTGCCTTTTCAGGTCGCGTGCGGATTTTCACCTGAGGCTCTACAACT CCCTGCATCATCAGGCTCTTTTGGTAAAGAGGCTACTGCATCCAGATGCGCCGTTTGACACCTCCTTTGGGACCTATGCG GATTTCGATTTCAACCAGAGACTGTTGAAGGCAAAGGTATGCTTCGTGCGCTCGCCGCATTTTCTGGCCCACGCGCGCCC GGGGGGGGTGAGCGATCAACAACGGTTCACCGAGTCCCTGAGGGTGATACGCAAGAACTTCGGGGTTTTCTGGGCGTTGG CGGCTCTGACGGGGTATTTGGCGATGAAGTCGCTTCCCATCTTCAAGAGGCTGCGCCCACTTCACAAGGGATCTTTTAAG GATGTCAGATGA
Upstream 100 bases:
>100_bases CTGCTCTTGAAATTCGATAGGGCTGTGATGATCTACAAGCTTCTCTTTGGAGAAGGGACCGGCGGTCTCCCGTCCGCCCG TGAGCCGAGGCGCTGACCCA
Downstream 100 bases:
>100_bases ACGGTGAACCGACCAAGGCAGACGGCGTCAAGTGGGACAAGGTGATGCGGCCGCGCAGCGACTGGTTCGACATCCATCCC GGCGAGATCTGGAGATACAG
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAAD DESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYA DFDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK DVR
Sequences:
>Translated_243_residues MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAAD DESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYA DFDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK DVR >Mature_242_residues ARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYWVSEPDAGIYHAMNKGWEAADD ESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCLFRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYAD FDFNQRLLKAKVCFVRSPHFLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFKD VR
Specific function: Involved in glycosylation steps downstream of mono-O- methyl-glycosyl-p-hydroxybenzoic acid derivative (p-HBAD I) and 2- O-methyl-rhamnosyl-phenolphthiocerol dimycocerosate (mycoside B) during the p-hydroxybenzoic acid derivatives (p-HBAD) and glycosylate
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788368, Length=231, Percent_Identity=28.5714285714286, Blast_Score=69, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 27635; Mature: 27504
Theoretical pI: Translated: 7.72; Mature: 7.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYW CCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCEEEE VSEPDAGIYHAMNKGWEAADDESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCL ECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHH FRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYADFDFNQRLLKAKVCFVRSPH HCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCC FLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC DVR CCC >Mature Secondary Structure ARISVITVVRNGAECLEETMLSVLEQKTQRDLEYIVIDGASTDGSVDIIRRHAGRLHYW CCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHCCCCEEEE VSEPDAGIYHAMNKGWEAADDESFVLFMGAGDRVLSLPGDEELEQGDVVYGDVYMGERCL ECCCCCHHHHHHCCCCCCCCCCCEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCCHHH FRSRADFHLRLYNSLHHQALLVKRLLHPDAPFDTSFGTYADFDFNQRLLKAKVCFVRSPH HCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHHHHHHHHHHEECCC FLAHARPGGVSDQQRFTESLRVIRKNFGVFWALAALTGYLAMKSLPIFKRLRPLHKGSFK CEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCC DVR CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]