Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118949

Identifier: 197118949

GI number: 197118949

Start: 2982083

End: 2982949

Strand: Reverse

Name: 197118949

Synonym: Gbem_2572

Alternate gene names: NA

Gene position: 2982949-2982083 (Counterclockwise)

Preceding gene: 197118950

Following gene: 197118948

Centisome position: 64.63

GC content: 56.75

Gene sequence:

>867_bases
ATGAAAGATTTCGTGCTGAGGAAATTGGGAAAGGCGGTAGACGCCTCGCTGCCATTTGAATCGCGACAGAACAGTCAGCC
GGTCCAGCGTAACCTCTTTTTCCAGTACCAGGAGATAGTGTCCCGCGGTTGCGCGCTTCCTTGCTTCAGGGATACCGGGT
TCAGGGTCTATTCGCAAACCGACGAGGACGGCCTGCTCCTCTATCTTTTTGCCCTGATCGGCTTCACCAACAGGGTGGTG
CTGGACATAGCCGCTGGGGCGCCGGTAGGCGGTAACACCACCAATCTCATAACCAACTGGGGCTGCCATGCCTTGCTCAT
CGAGGGGAATGCCAAGCAGGTAGCGGAATCGGGGATCTTTTACCAGCGTCATCCGGACACAAGGCTAGCCCCCCCGCGCA
TCCGGCAGGCCTGGGTCACTGCGGAAAACATCAATCAGCTGATAACTGGGGAGGGGTTCTTCGGCGAGATCGATCTCTTA
TCACTTGATGTGGACGGCGTCGACTACTGGCTTTGGGAAAGCCTTGATGCAGTATCGCCGCGTGTGGTAATGGTCGAGTA
CCAGGATCTCTTTTATCACGACGAGGCTGTGACAGTGCCGTACCGCCCGGACTTCGACAGGTTCTCAGTTCATCCTGATT
ATTTCGGGGCGAGTCTGGCTGCCTTTGTCAAGCTGGCGCGCCGTAAAGGATACCGCCTGGTGGGGTGCAACAGATACGGA
TTCAACGCCTTCTTTGTGCGCAATGACCTGGCAGGCTCCCTCCTACCAGAGGTTTCGGTGGAATCATGCCTGACGCATCC
GAAGGTGCTGGCGGCACGTGATGCCAAGAGAGCGGAGCTCCTTGAGTTACCTTGGGAGGTAGTGTGA

Upstream 100 bases:

>100_bases
ATGACGACTTCCGTAGAATCGTCGAGGTCGACGACTGGCTGAACAGTGACACGAACGACTTCAAGGACGCGGTAACAAAG
TTGTGATCTACGGAGATGTC

Downstream 100 bases:

>100_bases
TATTTGAGCAGGTGAACCACGCCGGCACTCTATTGGCCATAATCATCACGAACTCGTTCGCTAAACCGGGAGTCCACTTC
TTCACGCCCGACGCGTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKDFVLRKLGKAVDASLPFESRQNSQPVQRNLFFQYQEIVSRGCALPCFRDTGFRVYSQTDEDGLLLYLFALIGFTNRVV
LDIAAGAPVGGNTTNLITNWGCHALLIEGNAKQVAESGIFYQRHPDTRLAPPRIRQAWVTAENINQLITGEGFFGEIDLL
SLDVDGVDYWLWESLDAVSPRVVMVEYQDLFYHDEAVTVPYRPDFDRFSVHPDYFGASLAAFVKLARRKGYRLVGCNRYG
FNAFFVRNDLAGSLLPEVSVESCLTHPKVLAARDAKRAELLELPWEVV

Sequences:

>Translated_288_residues
MKDFVLRKLGKAVDASLPFESRQNSQPVQRNLFFQYQEIVSRGCALPCFRDTGFRVYSQTDEDGLLLYLFALIGFTNRVV
LDIAAGAPVGGNTTNLITNWGCHALLIEGNAKQVAESGIFYQRHPDTRLAPPRIRQAWVTAENINQLITGEGFFGEIDLL
SLDVDGVDYWLWESLDAVSPRVVMVEYQDLFYHDEAVTVPYRPDFDRFSVHPDYFGASLAAFVKLARRKGYRLVGCNRYG
FNAFFVRNDLAGSLLPEVSVESCLTHPKVLAARDAKRAELLELPWEVV
>Mature_288_residues
MKDFVLRKLGKAVDASLPFESRQNSQPVQRNLFFQYQEIVSRGCALPCFRDTGFRVYSQTDEDGLLLYLFALIGFTNRVV
LDIAAGAPVGGNTTNLITNWGCHALLIEGNAKQVAESGIFYQRHPDTRLAPPRIRQAWVTAENINQLITGEGFFGEIDLL
SLDVDGVDYWLWESLDAVSPRVVMVEYQDLFYHDEAVTVPYRPDFDRFSVHPDYFGASLAAFVKLARRKGYRLVGCNRYG
FNAFFVRNDLAGSLLPEVSVESCLTHPKVLAARDAKRAELLELPWEVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32492; Mature: 32492

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDFVLRKLGKAVDASLPFESRQNSQPVQRNLFFQYQEIVSRGCALPCFRDTGFRVYSQT
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECC
DEDGLLLYLFALIGFTNRVVLDIAAGAPVGGNTTNLITNWGCHALLIEGNAKQVAESGIF
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCHHHHHHCCCE
YQRHPDTRLAPPRIRQAWVTAENINQLITGEGFFGEIDLLSLDVDGVDYWLWESLDAVSP
EEECCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC
RVVMVEYQDLFYHDEAVTVPYRPDFDRFSVHPDYFGASLAAFVKLARRKGYRLVGCNRYG
EEEEEEEHHHEEECCEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
FNAFFVRNDLAGSLLPEVSVESCLTHPKVLAARDAKRAELLELPWEVV
CEEEEEECCCCCHHCCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKDFVLRKLGKAVDASLPFESRQNSQPVQRNLFFQYQEIVSRGCALPCFRDTGFRVYSQT
CCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCEEEEECC
DEDGLLLYLFALIGFTNRVVLDIAAGAPVGGNTTNLITNWGCHALLIEGNAKQVAESGIF
CCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCEEEECCCCEEEEEECCHHHHHHCCCE
YQRHPDTRLAPPRIRQAWVTAENINQLITGEGFFGEIDLLSLDVDGVDYWLWESLDAVSP
EEECCCCCCCCHHHHHHHCCHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHHHCCC
RVVMVEYQDLFYHDEAVTVPYRPDFDRFSVHPDYFGASLAAFVKLARRKGYRLVGCNRYG
EEEEEEEHHHEEECCEEEECCCCCCCCEECCCCHHHHHHHHHHHHHHHCCCEEEEECCCC
FNAFFVRNDLAGSLLPEVSVESCLTHPKVLAARDAKRAELLELPWEVV
CEEEEEECCCCCHHCCCCCHHHHHCCCHHHHHCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA