Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118944

Identifier: 197118944

GI number: 197118944

Start: 2977612

End: 2978511

Strand: Reverse

Name: 197118944

Synonym: Gbem_2567

Alternate gene names: NA

Gene position: 2978511-2977612 (Counterclockwise)

Preceding gene: 197118945

Following gene: 197118943

Centisome position: 64.54

GC content: 59.0

Gene sequence:

>900_bases
ATGGACGCTCCGCCGATAGCTCTGTTCGCGTATAACCGCCTGACCCACACCAGGCGCACCGTCGAGGCACTGCAAAAGAA
CCATGGTGCGGACAAGAGTCCCCTCTACGTCTTTTGCGACGGTCCCAAAAGCGAGCGCGATCTCGACGCCGTCAACGAGG
TTCGAGCCTATCTTAAGGGCGTCGACGGATTTTCATCGGTAGAGGTGATCGAGAGCGAGGCGAACGCAGGTCTTGCCGCC
TCCCTGACAAGGGGGATCTGCTTGGTCCTCGATGAGTACGATTCCATAATCGTGCTGGAAGACGATCTGGTCACCTCTCC
CTATTTTCTGAAGTTCATGCGTGACGCATTGCGCCGCTACCGGGACGAGGAGAGGGTGGCGTCGGTAAGCGGATACTCCT
TTCCTCTGGGCATAAAAACCGCCGAAACCTTTCTCTTGAACTACACGGCCTGCTGGGGGTGGGGTACCTGGCGCAGGGGC
TGGCAGCTCTTCGAGCCCTCGGGGGAAAAGCTCCTATCGGAAATCGGCAAGAGGGGCCTTAGCCACGAGTTCGACATGCG
GGGCGCCTATCCCTACACCCGGATGCTTGAGGACCAGTGCCGCGGCAAGGTTGACTCGTGGGCTGTGCGGTGGCACGCCT
CGCTCTTTCTCGCGGGCAGGCTCATGCTTTTTCCCGGCAGATCCCTGGTCAACAACATAGGCCATGACGGAAGCGGGGTG
AATTGCCAAGGCGCCTCCCACTTTGACGTCACCCTCTCGGATACGGCGGTCCTGATAGGGGACGTACCGCTTGCCGCGGA
TGCCACGGTTGCCGCCGCAATGGAAAAGTTTTTCAGGGAGCTGAACCCTGGGCTGTTCCGTTACCTACTGCGCAAATTAA
CCACGAGATTCTCACTATGA

Upstream 100 bases:

>100_bases
GCCTATCTGTCGCGTGAAACAACCACGGGGGCGGACGCCAACGTGCCGTTCGATGACAGTCAGAGCCATGACGGAACAGA
CGCAGTCAGAAGGTGAAACC

Downstream 100 bases:

>100_bases
CGCTTACTCCCGACATACGGACCGCCGGCAGGGAACCTCTCATGATGCTGAACGTGGGTTGCGGCGACACATCGCATCCT
GACTGGACCAACCTGGACTT

Product: glycosyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA
SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG
WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV
NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL

Sequences:

>Translated_299_residues
MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA
SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG
WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV
NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL
>Mature_299_residues
MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKGVDGFSSVEVIESEANAGLAA
SLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRYRDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRG
WQLFEPSGEKLLSEIGKRGLSHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV
NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33511; Mature: 33511

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKG
CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
VDGFSSVEVIESEANAGLAASLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRY
CCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH
RDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRGWQLFEPSGEKLLSEIGKRGL
CCHHHHHHCCCCCCCCCCHHHHHHHEECCEEECCCHHHCCCEEECCCHHHHHHHHHHHCC
SHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCC
NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL
CCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDAPPIALFAYNRLTHTRRTVEALQKNHGADKSPLYVFCDGPKSERDLDAVNEVRAYLKG
CCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
VDGFSSVEVIESEANAGLAASLTRGICLVLDEYDSIIVLEDDLVTSPYFLKFMRDALRRY
CCCCCHHHHHHHCCCCCHHHHHHCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHH
RDEERVASVSGYSFPLGIKTAETFLLNYTACWGWGTWRRGWQLFEPSGEKLLSEIGKRGL
CCHHHHHHCCCCCCCCCCHHHHHHHEECCEEECCCHHHCCCEEECCCHHHHHHHHHHHCC
SHEFDMRGAYPYTRMLEDQCRGKVDSWAVRWHASLFLAGRLMLFPGRSLVNNIGHDGSGV
CCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEECCCHHHHHHCCCCCCCC
NCQGASHFDVTLSDTAVLIGDVPLAADATVAAAMEKFFRELNPGLFRYLLRKLTTRFSL
CCCCCCEEEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA