| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118935
Identifier: 197118935
GI number: 197118935
Start: 2969924
End: 2970553
Strand: Direct
Name: 197118935
Synonym: Gbem_2558
Alternate gene names: NA
Gene position: 2969924-2970553 (Clockwise)
Preceding gene: 197118934
Following gene: 197118936
Centisome position: 64.35
GC content: 62.54
Gene sequence:
>630_bases ATGAGCATGCTGTACCTCTGGCATCCCGCAGTCAGCACATCAGCAACCGAACTGGATCTGATACTTACCCGAGGCGACTC AGACCAGGTGGACGGCGGATCGGAAAGGTTCGTCGAGGCCGTCCTCAAAGCAGTGGGAATCAAACAACCGGCCGAGAAGT GGTCGATCAAACCGAACCGCTGCAACTTTTACGGCGAGTACTGGCGTGAGGGAGGGTGGCGCTCGCAGTGGGACTTCGCC TGGCGCATGGAGGCGCACTTCAAGAAACCGGTCGAGGTGAAACCACTGCCCACGGGGTACCAGGGGCTGATGGAGATCGA CGACTACTCGCCGCTGGCGGAAAGCTACAAGTACGAGCCTTACGCCTGCCTGGCGATCGCCGCCTTCAACTCGCAGGAAA AGGCCCGCGCAGCTGCGGAGAAACTCGCAGGGGACAAGGAGATAGAGGCGGCAAGACACGCGGCCGCCGCTCCCGAGCCG CAGATCAAGGTGCTGCAGGTGGCGCCTAAAGAGTTCCATCTGCGCGCCGCCATCGGCTCCGGGGACGAGCCCTTTTTCAC CGGAGGCTACCCGGCGCTGGTGCTATCCATGATGGAGGCGGCGGGCGGGGCTACCCATGCGGAAGGTTGA
Upstream 100 bases:
>100_bases AGGTCGTCCCCTACAGCGAAAACAGCTCGATGGGGACTCAGCTCGCCGCCAGCTACTCGAAAAGAGTCACCATAAAATTT CGTGGACCAGGAGACCCGTC
Downstream 100 bases:
>100_bases CTACCAACCCCATCTCTCCCCGGACGCGGCCAACCTGCAGCTGGCCCTGGATTGGCTCGCCCACCTGGTTAGCGGCTACC TGGGGGTGCGCTTCGGCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFA WRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEP QIKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG
Sequences:
>Translated_209_residues MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFA WRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEP QIKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG >Mature_208_residues SMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFAW RMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQ IKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23071; Mature: 22940
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNR CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCC CNFYGEYWREGGWRSQWDFAWRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEP CCCCHHHHHCCCCCCCCCEEEEEHHHCCCCCEECCCCCCHHHHEECCCCCCHHHHCCCCC YACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQIKVLQVAPKEFHLRAAIGS EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCC GDEPFFTGGYPALVLSMMEAAGGATHAEG CCCCCCCCCHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNR CEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCC CNFYGEYWREGGWRSQWDFAWRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEP CCCCHHHHHCCCCCCCCCEEEEEHHHCCCCCEECCCCCCHHHHEECCCCCCHHHHCCCCC YACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQIKVLQVAPKEFHLRAAIGS EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCC GDEPFFTGGYPALVLSMMEAAGGATHAEG CCCCCCCCCHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA