Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118935

Identifier: 197118935

GI number: 197118935

Start: 2969924

End: 2970553

Strand: Direct

Name: 197118935

Synonym: Gbem_2558

Alternate gene names: NA

Gene position: 2969924-2970553 (Clockwise)

Preceding gene: 197118934

Following gene: 197118936

Centisome position: 64.35

GC content: 62.54

Gene sequence:

>630_bases
ATGAGCATGCTGTACCTCTGGCATCCCGCAGTCAGCACATCAGCAACCGAACTGGATCTGATACTTACCCGAGGCGACTC
AGACCAGGTGGACGGCGGATCGGAAAGGTTCGTCGAGGCCGTCCTCAAAGCAGTGGGAATCAAACAACCGGCCGAGAAGT
GGTCGATCAAACCGAACCGCTGCAACTTTTACGGCGAGTACTGGCGTGAGGGAGGGTGGCGCTCGCAGTGGGACTTCGCC
TGGCGCATGGAGGCGCACTTCAAGAAACCGGTCGAGGTGAAACCACTGCCCACGGGGTACCAGGGGCTGATGGAGATCGA
CGACTACTCGCCGCTGGCGGAAAGCTACAAGTACGAGCCTTACGCCTGCCTGGCGATCGCCGCCTTCAACTCGCAGGAAA
AGGCCCGCGCAGCTGCGGAGAAACTCGCAGGGGACAAGGAGATAGAGGCGGCAAGACACGCGGCCGCCGCTCCCGAGCCG
CAGATCAAGGTGCTGCAGGTGGCGCCTAAAGAGTTCCATCTGCGCGCCGCCATCGGCTCCGGGGACGAGCCCTTTTTCAC
CGGAGGCTACCCGGCGCTGGTGCTATCCATGATGGAGGCGGCGGGCGGGGCTACCCATGCGGAAGGTTGA

Upstream 100 bases:

>100_bases
AGGTCGTCCCCTACAGCGAAAACAGCTCGATGGGGACTCAGCTCGCCGCCAGCTACTCGAAAAGAGTCACCATAAAATTT
CGTGGACCAGGAGACCCGTC

Downstream 100 bases:

>100_bases
CTACCAACCCCATCTCTCCCCGGACGCGGCCAACCTGCAGCTGGCCCTGGATTGGCTCGCCCACCTGGTTAGCGGCTACC
TGGGGGTGCGCTTCGGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 208

Protein sequence:

>209_residues
MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFA
WRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEP
QIKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG

Sequences:

>Translated_209_residues
MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFA
WRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEP
QIKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG
>Mature_208_residues
SMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNRCNFYGEYWREGGWRSQWDFAW
RMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEPYACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQ
IKVLQVAPKEFHLRAAIGSGDEPFFTGGYPALVLSMMEAAGGATHAEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23071; Mature: 22940

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNR
CCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCC
CNFYGEYWREGGWRSQWDFAWRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEP
CCCCHHHHHCCCCCCCCCEEEEEHHHCCCCCEECCCCCCHHHHEECCCCCCHHHHCCCCC
YACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQIKVLQVAPKEFHLRAAIGS
EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCC
GDEPFFTGGYPALVLSMMEAAGGATHAEG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SMLYLWHPAVSTSATELDLILTRGDSDQVDGGSERFVEAVLKAVGIKQPAEKWSIKPNR
CEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCCCCCC
CNFYGEYWREGGWRSQWDFAWRMEAHFKKPVEVKPLPTGYQGLMEIDDYSPLAESYKYEP
CCCCHHHHHCCCCCCCCCEEEEEHHHCCCCCEECCCCCCHHHHEECCCCCCHHHHCCCCC
YACLAIAAFNSQEKARAAAEKLAGDKEIEAARHAAAAPEPQIKVLQVAPKEFHLRAAIGS
EEEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEECCC
GDEPFFTGGYPALVLSMMEAAGGATHAEG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA