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The map label for this gene is 197118917

Identifier: 197118917

GI number: 197118917

Start: 2943574

End: 2945451

Strand: Direct

Name: 197118917

Synonym: Gbem_2540

Alternate gene names: NA

Gene position: 2943574-2945451 (Clockwise)

Preceding gene: 197118915

Following gene: 197118919

Centisome position: 63.78

GC content: 57.93

Gene sequence:

>1878_bases
ATGGTCGATCCTGCGGAAAAAGAAGCTGTTCATACCCTGTTGAATGCGTACCAGCGTTCTTCAAAGCGCAAATCCCCCTT
CTTCCTGATAGCCCGAATAGGTTCCGGCTACGCCGCTATGGCAGCCTTCACCATTTTGGCGCTCTTTTTTTCGGCGCTGA
ACCTGACGGCGATCAACAAGACCGCCCGCGAGATCACCTATAGGGACCTCCCCGCCATCAGCGCCCTGATAAAGTTGCGT
GCTTCGTTGCAAGCGCAGGAGCGCTACGCGGGTAAATACGCCATCCTCAAAGACTCCGCTTTTGTCGACCTATTCCGTAC
TCGCGAAAGGGAGTTTGTGGCCAATCTGAGGATACTGGAACAGACAGGGCCGATCCAGGACCTGGCTGAATTGAAAAGAA
ACTACCTAACTTACCAGCAGGCGGCGCAAAGGCTTCTCGGGGGTAATCCCGCAGACCCGGCCTCGCATAGGGCATCCGCG
GCCCAGCTCTTCGAATCGATAAACAGCGTGTACGTGAAGCGCCAGGCGAAGCTGCATGCCGTGATAGAACACGCCGAACT
TCAGCGGAAGTCCGCGATCAAGTGGACCATCATAATTGCCTGCGCCGGCTTCTTGCTTACCGCCTGGATTGCTCCCTGGG
TCACCAACCGCATTTTCCGCGCAACCAGAAAGTTGCAGCTCGCTACCCACCGCGCTTTGTCAGGTGACTTCTCTTTTCCT
CCACAAATACAGGCGAACGACGAGATTCTCGATCTGGCTGACGATGTCACCACTATGACCAAAAAACTTGCCGAACTCGA
AAACCTGAACTTTGGCCCAAAGCAGCATGCCGGAGACCTGACCACCGAGATATTCATAGAAGAACAGGTGCAAAGGGGAA
CGGGGTGTGCCTTGTGCGATATACGAATGAACGCCTTGGATGTTGTGGTGGCTCAGCATGGATTCCGAAAGGCCGCGGAT
TTGCTGCATCTGACCGGCAACCTGCTCCGCCGCGCAGCCATCGAGCACGGTTGCGCCGATGGTTTCCTTGGCCATGTCGG
GGGTGACAGCTTCATTGTCGCAGTGCCGCCGGACAGGGTTGAAAGCTTTTCCAAAAGGGTGATAGACCGCTTCGAGACCG
AGGTGCCGGCGGTGCTGAACCCCGGCGCGGCGGAAGAGGATGCCGACCCATTGAGCCCCCACCGCCCCGCGTCGGTCACC
ACAATTACCATTTCGACCATACTTTGCGGTTCGGGTCAGGCGCCCGCTGCCGCGGAGGTCGCCAGGGCCATGGACAGCTT
CAAGGGCAAAAGGTCGGGGAATTTTTTTCGGAGCGGATGGGACATGGTTTCCTTCCCCTTTGTCGCCGTCGTGCTGGCCG
TGAGTCTGTTAAGCGGCTGCGCCACGATGCAGCACCAGGAGGGAAGGCAGCCAACCGGGCCTCAAATGAAAGAATCGACC
CAGCACGCGACCGAGGCCTGGTCCTGGAGAAAGATGATGGGGAGACAGTTGGACCAGGCGGTCAGGGCCATCCAACGCAA
AGACACGCAAGGCGCCGCCAGGAGGCTCAAAACCATCGTCAACCAGCGCGATGTCCCTGGAGTGACCGACGAGGCGCTCT
TCCGCCTCGCCCTGCTCTCGATGAATCCTAGTATGGAGAGGCCTGCATCCGAGAGGGGGATTCAGTTGTTGAAACGGCTA
AAGCGGGACTTCCCCAGGAGCAGTTGGGCCGTCCAGGCCGAGCCGCTGCTGGAGTTGGTTGATGTGGCCGAGAACCTGAA
GGCCCAGAGCAGGAGTTTGTCGAACGCCAAGGAAGCGGTTGATGCGGAGAACAGGGACCTTGCTACCAAGCTGAAACAGT
TGAAGCGGCTGGATATGGAGCTAGAGCGTACGCCGTAA

Upstream 100 bases:

>100_bases
CGCGGACATCCATTTTTTTGGATACCTGAAAGCAGGCTGGCAACTGCGCTGCAGAAGGGGTAATGCGCAGGTAGGTGCGA
CAAATATGGGAGGGGCGGCC

Downstream 100 bases:

>100_bases
TAATTACTTCAACTGACTGTCCTTGCTGCCTCTACGATTGTAGAGCGTCTCCGCCTTCTGCCTCTTTTCGATTTCCGATT
GGCAGCTGACACAATAGCGT

Product: HAMP domain-containing protein

Products: NA

Alternate protein names: GGDEF Domain-Containing Protein; Histidine Kinase; GGDEF Domain Protein; HAMP Domain-Containing Protein; GGDEF Domain/HAMP Domain-Containing Protein; Methyl-Accepting Chemotaxis Sensory Transducer; Lipoprotein

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MVDPAEKEAVHTLLNAYQRSSKRKSPFFLIARIGSGYAAMAAFTILALFFSALNLTAINKTAREITYRDLPAISALIKLR
ASLQAQERYAGKYAILKDSAFVDLFRTREREFVANLRILEQTGPIQDLAELKRNYLTYQQAAQRLLGGNPADPASHRASA
AQLFESINSVYVKRQAKLHAVIEHAELQRKSAIKWTIIIACAGFLLTAWIAPWVTNRIFRATRKLQLATHRALSGDFSFP
PQIQANDEILDLADDVTTMTKKLAELENLNFGPKQHAGDLTTEIFIEEQVQRGTGCALCDIRMNALDVVVAQHGFRKAAD
LLHLTGNLLRRAAIEHGCADGFLGHVGGDSFIVAVPPDRVESFSKRVIDRFETEVPAVLNPGAAEEDADPLSPHRPASVT
TITISTILCGSGQAPAAAEVARAMDSFKGKRSGNFFRSGWDMVSFPFVAVVLAVSLLSGCATMQHQEGRQPTGPQMKEST
QHATEAWSWRKMMGRQLDQAVRAIQRKDTQGAARRLKTIVNQRDVPGVTDEALFRLALLSMNPSMERPASERGIQLLKRL
KRDFPRSSWAVQAEPLLELVDVAENLKAQSRSLSNAKEAVDAENRDLATKLKQLKRLDMELERTP

Sequences:

>Translated_625_residues
MVDPAEKEAVHTLLNAYQRSSKRKSPFFLIARIGSGYAAMAAFTILALFFSALNLTAINKTAREITYRDLPAISALIKLR
ASLQAQERYAGKYAILKDSAFVDLFRTREREFVANLRILEQTGPIQDLAELKRNYLTYQQAAQRLLGGNPADPASHRASA
AQLFESINSVYVKRQAKLHAVIEHAELQRKSAIKWTIIIACAGFLLTAWIAPWVTNRIFRATRKLQLATHRALSGDFSFP
PQIQANDEILDLADDVTTMTKKLAELENLNFGPKQHAGDLTTEIFIEEQVQRGTGCALCDIRMNALDVVVAQHGFRKAAD
LLHLTGNLLRRAAIEHGCADGFLGHVGGDSFIVAVPPDRVESFSKRVIDRFETEVPAVLNPGAAEEDADPLSPHRPASVT
TITISTILCGSGQAPAAAEVARAMDSFKGKRSGNFFRSGWDMVSFPFVAVVLAVSLLSGCATMQHQEGRQPTGPQMKEST
QHATEAWSWRKMMGRQLDQAVRAIQRKDTQGAARRLKTIVNQRDVPGVTDEALFRLALLSMNPSMERPASERGIQLLKRL
KRDFPRSSWAVQAEPLLELVDVAENLKAQSRSLSNAKEAVDAENRDLATKLKQLKRLDMELERTP
>Mature_625_residues
MVDPAEKEAVHTLLNAYQRSSKRKSPFFLIARIGSGYAAMAAFTILALFFSALNLTAINKTAREITYRDLPAISALIKLR
ASLQAQERYAGKYAILKDSAFVDLFRTREREFVANLRILEQTGPIQDLAELKRNYLTYQQAAQRLLGGNPADPASHRASA
AQLFESINSVYVKRQAKLHAVIEHAELQRKSAIKWTIIIACAGFLLTAWIAPWVTNRIFRATRKLQLATHRALSGDFSFP
PQIQANDEILDLADDVTTMTKKLAELENLNFGPKQHAGDLTTEIFIEEQVQRGTGCALCDIRMNALDVVVAQHGFRKAAD
LLHLTGNLLRRAAIEHGCADGFLGHVGGDSFIVAVPPDRVESFSKRVIDRFETEVPAVLNPGAAEEDADPLSPHRPASVT
TITISTILCGSGQAPAAAEVARAMDSFKGKRSGNFFRSGWDMVSFPFVAVVLAVSLLSGCATMQHQEGRQPTGPQMKEST
QHATEAWSWRKMMGRQLDQAVRAIQRKDTQGAARRLKTIVNQRDVPGVTDEALFRLALLSMNPSMERPASERGIQLLKRL
KRDFPRSSWAVQAEPLLELVDVAENLKAQSRSLSNAKEAVDAENRDLATKLKQLKRLDMELERTP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69228; Mature: 69228

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDPAEKEAVHTLLNAYQRSSKRKSPFFLIARIGSGYAAMAAFTILALFFSALNLTAINK
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAREITYRDLPAISALIKLRASLQAQERYAGKYAILKDSAFVDLFRTREREFVANLRILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
QTGPIQDLAELKRNYLTYQQAAQRLLGGNPADPASHRASAAQLFESINSVYVKRQAKLHA
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEHAELQRKSAIKWTIIIACAGFLLTAWIAPWVTNRIFRATRKLQLATHRALSGDFSFP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PQIQANDEILDLADDVTTMTKKLAELENLNFGPKQHAGDLTTEIFIEEQVQRGTGCALCD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
IRMNALDVVVAQHGFRKAADLLHLTGNLLRRAAIEHGCADGFLGHVGGDSFIVAVPPDRV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCHHHH
ESFSKRVIDRFETEVPAVLNPGAAEEDADPLSPHRPASVTTITISTILCGSGQAPAAAEV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEECCCCCCHHHHH
ARAMDSFKGKRSGNFFRSGWDMVSFPFVAVVLAVSLLSGCATMQHQEGRQPTGPQMKEST
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QHATEAWSWRKMMGRQLDQAVRAIQRKDTQGAARRLKTIVNQRDVPGVTDEALFRLALLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MNPSMERPASERGIQLLKRLKRDFPRSSWAVQAEPLLELVDVAENLKAQSRSLSNAKEAV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAENRDLATKLKQLKRLDMELERTP
CCCCHHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MVDPAEKEAVHTLLNAYQRSSKRKSPFFLIARIGSGYAAMAAFTILALFFSALNLTAINK
CCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
TAREITYRDLPAISALIKLRASLQAQERYAGKYAILKDSAFVDLFRTREREFVANLRILE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHH
QTGPIQDLAELKRNYLTYQQAAQRLLGGNPADPASHRASAAQLFESINSVYVKRQAKLHA
HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIEHAELQRKSAIKWTIIIACAGFLLTAWIAPWVTNRIFRATRKLQLATHRALSGDFSFP
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PQIQANDEILDLADDVTTMTKKLAELENLNFGPKQHAGDLTTEIFIEEQVQRGTGCALCD
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
IRMNALDVVVAQHGFRKAADLLHLTGNLLRRAAIEHGCADGFLGHVGGDSFIVAVPPDRV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCCEEEEECCHHHH
ESFSKRVIDRFETEVPAVLNPGAAEEDADPLSPHRPASVTTITISTILCGSGQAPAAAEV
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHEEECCCCCCHHHHH
ARAMDSFKGKRSGNFFRSGWDMVSFPFVAVVLAVSLLSGCATMQHQEGRQPTGPQMKEST
HHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
QHATEAWSWRKMMGRQLDQAVRAIQRKDTQGAARRLKTIVNQRDVPGVTDEALFRLALLS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
MNPSMERPASERGIQLLKRLKRDFPRSSWAVQAEPLLELVDVAENLKAQSRSLSNAKEAV
CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAENRDLATKLKQLKRLDMELERTP
CCCCHHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA