| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118915
Identifier: 197118915
GI number: 197118915
Start: 2941140
End: 2941781
Strand: Direct
Name: 197118915
Synonym: Gbem_2538
Alternate gene names: NA
Gene position: 2941140-2941781 (Clockwise)
Preceding gene: 197118910
Following gene: 197118917
Centisome position: 63.73
GC content: 50.93
Gene sequence:
>642_bases ATGACAGTCAAATCATTAGTGTTCTTGACGGTTTTGTCGTTTCTGGTTGGTCTGCCTGTTCATGCACGGGCTGTCCTCAT CAACTTTGACGATGTGGCAGCCGGCACGGTGATCAACAACCATTACTCAGGGGTGACCTTCACCAAACTTCTCAATGGGC AATACGGTGGGGATATCTATGCCAACGGGACGTTCCCAACAATGAGTGAATCAAACCCCAACGTCGTGTCGATTTTCCAA TCGACCTACCCAGGCTTCGACAACAGGTTCGGTACAATCCGGGCGACATTTGCCACAGCTCAAAATTCGGTGAGTATTGA TACAATCCTCACGGCCGCCCCTGAGGGATTTGGAACCACCGGGATCGGTTACATGAAAGCCTATGATGCCCTTGGACATC TTTTGGGGACCGATACCACTTCGGTTTTAAATGTTTACGAGACCTTGACTGTTGCTGCACCGAACATCTCCGACATCTTT TTTACGGTCCAGTTCATGGAATTTCCTACCTACGGCGCGTTCGATAATTTAAATTTCACCACCGGGGATACTACGCCGCC GATACCGGAACCCTCCACCATCATCCTTCTCGGTGCCGGCTTGGCAGGGCTTGCCTTAGCCAGGAGGAGAGTGCGGCAGT AA
Upstream 100 bases:
>100_bases CTTACAAAACAGCGTTCCATCGGGCACAAACATTGCTCTACTGAACTTCTGTGTACTTTGGGGCGGCGATTCAGTAACCA AAAAAAAGGGGGGGGGTACT
Downstream 100 bases:
>100_bases CGCTTCCCGCCAAATTCCGACAGCGATTTGAGTGGCAGAAGGCTTCCAGAAATGGAAGCCTTCTTTCGTTTGCCCGCTCA AGCTCCGCTTCGTTCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 213; Mature: 212
Protein sequence:
>213_residues MTVKSLVFLTVLSFLVGLPVHARAVLINFDDVAAGTVINNHYSGVTFTKLLNGQYGGDIYANGTFPTMSESNPNVVSIFQ STYPGFDNRFGTIRATFATAQNSVSIDTILTAAPEGFGTTGIGYMKAYDALGHLLGTDTTSVLNVYETLTVAAPNISDIF FTVQFMEFPTYGAFDNLNFTTGDTTPPIPEPSTIILLGAGLAGLALARRRVRQ
Sequences:
>Translated_213_residues MTVKSLVFLTVLSFLVGLPVHARAVLINFDDVAAGTVINNHYSGVTFTKLLNGQYGGDIYANGTFPTMSESNPNVVSIFQ STYPGFDNRFGTIRATFATAQNSVSIDTILTAAPEGFGTTGIGYMKAYDALGHLLGTDTTSVLNVYETLTVAAPNISDIF FTVQFMEFPTYGAFDNLNFTTGDTTPPIPEPSTIILLGAGLAGLALARRRVRQ >Mature_212_residues TVKSLVFLTVLSFLVGLPVHARAVLINFDDVAAGTVINNHYSGVTFTKLLNGQYGGDIYANGTFPTMSESNPNVVSIFQS TYPGFDNRFGTIRATFATAQNSVSIDTILTAAPEGFGTTGIGYMKAYDALGHLLGTDTTSVLNVYETLTVAAPNISDIFF TVQFMEFPTYGAFDNLNFTTGDTTPPIPEPSTIILLGAGLAGLALARRRVRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22767; Mature: 22636
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKSLVFLTVLSFLVGLPVHARAVLINFDDVAAGTVINNHYSGVTFTKLLNGQYGGDIY CCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEHHHCCCCCCEEE ANGTFPTMSESNPNVVSIFQSTYPGFDNRFGTIRATFATAQNSVSIDTILTAAPEGFGTT ECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEECCCCCEEEHEEEECCCCCCCC GIGYMKAYDALGHLLGTDTTSVLNVYETLTVAAPNISDIFFTVQFMEFPTYGAFDNLNFT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCEEC TGDTTPPIPEPSTIILLGAGLAGLALARRRVRQ CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC >Mature Secondary Structure TVKSLVFLTVLSFLVGLPVHARAVLINFDDVAAGTVINNHYSGVTFTKLLNGQYGGDIY CHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEECCCCCCEEEEHHHCCCCCCEEE ANGTFPTMSESNPNVVSIFQSTYPGFDNRFGTIRATFATAQNSVSIDTILTAAPEGFGTT ECCCCCCCCCCCCCEEEEEEHHCCCCCCCCCEEEEEEEECCCCCEEEHEEEECCCCCCCC GIGYMKAYDALGHLLGTDTTSVLNVYETLTVAAPNISDIFFTVQFMEFPTYGAFDNLNFT CHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCCCEEEEEEEEECCCCCCCCCCEEC TGDTTPPIPEPSTIILLGAGLAGLALARRRVRQ CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA