| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118910
Identifier: 197118910
GI number: 197118910
Start: 2933700
End: 2934395
Strand: Direct
Name: 197118910
Synonym: Gbem_2533
Alternate gene names: NA
Gene position: 2933700-2934395 (Clockwise)
Preceding gene: 197118906
Following gene: 197118915
Centisome position: 63.57
GC content: 56.9
Gene sequence:
>696_bases ATGAAGGCTACCAGCAAGATCATCGTCAAATTGTGTCTGTCTGTAGCGCTTTTAGCTGTCGCAGTTCCGGCAGGGGCCGT CCAGATCAACTTTACGGGCGGGACAGTGGTATTGGCCGATAGCTCGACCGGCACCACCAACAACAGCTTGAACTTCAGCA ACGTGGCCTATTACGACGAGGGGGGATTCAGACTGAGGTTCATAGACCAATCGGCTACCTCCTTCAGCTCCTACATCGGT GACTACTATAACGCCAGCAACGACGTCATACATGGTCACTGGGCCACCGGCGATTACGGCACCCTCACGAAGATCCTGGT AACGAAACTCGACGGTTCAGCTTTCGATTTGAATTACTTCGTACTCACGAGCAATACCGAGGTCGGCGGGTCTTTGGCGA CAGGCAACGAGCAGGCCTACATCCACGCCTCTACCGACGGGGTCTCCAGCAACTACTTCGAAACGCTCCCCGCGGAAAAT TGGGGCTTCCCCGCTACCCAGGTCTTCCTCGGCTCGCAGTTCGACGACATCAAGGCGTTCTGGTTCACCTCCGGGCCTCG TGTGGACTGCTTCGGCATGGACAACTTCTATATCGATGAAGAAGCTCCGCCTGCCGTGCCCGAGCCGTCCACCATACTTC TGCTAGGCGCAGGGCTCGCGGGTCTGGCTGTGTGGCGCAAGCGCAAGGCAGCATAA
Upstream 100 bases:
>100_bases CGCTTACCCTAACACAGACATTTAAGGTGTTTAAGTGCTTGGCTCTATATTTGCTGCCTACCCACTTTTTGTCAAATCCA AAGGAACAGGGAGGAAGGCT
Downstream 100 bases:
>100_bases GATCTAACCGGCATTCCATAGAAAGAAAGGGCCGCGGCATTACGCCACGGCCCTTTTCATTTCAGATCTCGATCCTGAAC TCTGCACCGTCGTTGACATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MKATSKIIVKLCLSVALLAVAVPAGAVQINFTGGTVVLADSSTGTTNNSLNFSNVAYYDEGGFRLRFIDQSATSFSSYIG DYYNASNDVIHGHWATGDYGTLTKILVTKLDGSAFDLNYFVLTSNTEVGGSLATGNEQAYIHASTDGVSSNYFETLPAEN WGFPATQVFLGSQFDDIKAFWFTSGPRVDCFGMDNFYIDEEAPPAVPEPSTILLLGAGLAGLAVWRKRKAA
Sequences:
>Translated_231_residues MKATSKIIVKLCLSVALLAVAVPAGAVQINFTGGTVVLADSSTGTTNNSLNFSNVAYYDEGGFRLRFIDQSATSFSSYIG DYYNASNDVIHGHWATGDYGTLTKILVTKLDGSAFDLNYFVLTSNTEVGGSLATGNEQAYIHASTDGVSSNYFETLPAEN WGFPATQVFLGSQFDDIKAFWFTSGPRVDCFGMDNFYIDEEAPPAVPEPSTILLLGAGLAGLAVWRKRKAA >Mature_231_residues MKATSKIIVKLCLSVALLAVAVPAGAVQINFTGGTVVLADSSTGTTNNSLNFSNVAYYDEGGFRLRFIDQSATSFSSYIG DYYNASNDVIHGHWATGDYGTLTKILVTKLDGSAFDLNYFVLTSNTEVGGSLATGNEQAYIHASTDGVSSNYFETLPAEN WGFPATQVFLGSQFDDIKAFWFTSGPRVDCFGMDNFYIDEEAPPAVPEPSTILLLGAGLAGLAVWRKRKAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24722; Mature: 24722
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKATSKIIVKLCLSVALLAVAVPAGAVQINFTGGTVVLADSSTGTTNNSLNFSNVAYYDE CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEC GGFRLRFIDQSATSFSSYIGDYYNASNDVIHGHWATGDYGTLTKILVTKLDGSAFDLNYF CCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHEEEEEEECCCCEEEEEEE VLTSNTEVGGSLATGNEQAYIHASTDGVSSNYFETLPAENWGFPATQVFLGSQFDDIKAF EEECCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE WFTSGPRVDCFGMDNFYIDEEAPPAVPEPSTILLLGAGLAGLAVWRKRKAA EECCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCC >Mature Secondary Structure MKATSKIIVKLCLSVALLAVAVPAGAVQINFTGGTVVLADSSTGTTNNSLNFSNVAYYDE CCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEC GGFRLRFIDQSATSFSSYIGDYYNASNDVIHGHWATGDYGTLTKILVTKLDGSAFDLNYF CCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHEEEEEEECCCCEEEEEEE VLTSNTEVGGSLATGNEQAYIHASTDGVSSNYFETLPAENWGFPATQVFLGSQFDDIKAF EEECCCCCCCEEECCCCEEEEEECCCCCCCCCEECCCCCCCCCCCEEEEECCCCCCEEEE WFTSGPRVDCFGMDNFYIDEEAPPAVPEPSTILLLGAGLAGLAVWRKRKAA EECCCCEEEEEECCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA