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The map label for this gene is yhjL [C]

Identifier: 197118892

GI number: 197118892

Start: 2915268

End: 2916065

Strand: Reverse

Name: yhjL [C]

Synonym: Gbem_2515

Alternate gene names: 197118892

Gene position: 2916065-2915268 (Counterclockwise)

Preceding gene: 197118894

Following gene: 197118890

Centisome position: 63.18

GC content: 59.9

Gene sequence:

>798_bases
ATGGGAACGACTTTTGACGAGAAACTGGCAGACGGGATAGCCCTGATGGAGTCGGGAGAGTATGTCCAGGCCGTCGAAGC
CTTCAAAGGGTGCATCTCGCTTGAGCCGGAGAACGCCGAGGGTTATTTCTACTTGGGCGAGGCGTACTCGGAGCAGGGGA
AGGCCGACGATGCCATCGCTGCGCTCAAGAAGGGGCTGGAGCTTGCGCCTGAAGACCTCGACGGGATCACGGCCCTGGGC
GACGTTTATTTCGAATCGGGCAAGCACAAGGATGCGCTCGGCTGTTACCGCAAGGTGACCGAGCTGCAGCCCAAGGAGTG
CGACGGCTACGTCAGCATGGGCCTTGTGTACAACGCGATGGAACGGACCGAAGATGCGCTGAAGTCCTTCCAGAAGGCGC
TTGAACTCGATCCCAAAAACGTCTTCGCCCTGAACGCCATGGGGGACCTTTATTACGGTCTCGGGGAGAATGAGAAGGCG
ATCGAGGCCTACCACAAGGGAATCGAGATCGATCCCGCTGACGCCACCGCCCGCTTCAACTTGGGGGAGCTCTACTACGA
CATGGACGACCTCGAGTCGGCCGAGCGCGAGACGCTGGAAGCGGTCCGCCTCGACCCCGATTTCACCATGAGCTATCTTA
CGCTGGGAAACATCTGCATCGACCAGGACCGCACCCAGGAGGCGATCAAGTACTTCGAGAGCTACCTGGCCAGGGAACAC
TCCCCGCAGGCCCGCGAGATGATCGCCGAGGTGAAGGCTGTGGTGGAAGGGTTGAAGGAAGAGATGCGCGGGCAATAG

Upstream 100 bases:

>100_bases
GTATTTTAATGCTATTTTAACGGGCGTTTAAGATGGCAAAGCATAATCATCTCTGTTATAGTGTGCGCCAATGAAATCAG
TTGCAGACGCGGAGGTGGCA

Downstream 100 bases:

>100_bases
CCGCAGCAGGGACAATCTAAAGAATGGAAAAGGGGAGCCGGTTGGCTCCCCTTTCTTATTTAGGGTGATCGTTTCCCGCC
CCCGGAGGGGGAGGGGCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 264

Protein sequence:

>265_residues
MGTTFDEKLADGIALMESGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIAALKKGLELAPEDLDGITALG
DVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAMERTEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKA
IEAYHKGIEIDPADATARFNLGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYFESYLAREH
SPQAREMIAEVKAVVEGLKEEMRGQ

Sequences:

>Translated_265_residues
MGTTFDEKLADGIALMESGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIAALKKGLELAPEDLDGITALG
DVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAMERTEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKA
IEAYHKGIEIDPADATARFNLGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYFESYLAREH
SPQAREMIAEVKAVVEGLKEEMRGQ
>Mature_264_residues
GTTFDEKLADGIALMESGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIAALKKGLELAPEDLDGITALGD
VYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAMERTEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAI
EAYHKGIEIDPADATARFNLGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYFESYLAREHS
PQAREMIAEVKAVVEGLKEEMRGQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 7 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307148, Length=221, Percent_Identity=28.0542986425339, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI32307150, Length=221, Percent_Identity=28.0542986425339, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI167466177, Length=204, Percent_Identity=24.0196078431373, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI167466175, Length=204, Percent_Identity=24.0196078431373, Blast_Score=85, Evalue=6e-17,
Organism=Homo sapiens, GI301336134, Length=212, Percent_Identity=27.3584905660377, Blast_Score=82, Evalue=7e-16,
Organism=Homo sapiens, GI83415184, Length=203, Percent_Identity=28.0788177339901, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI118766328, Length=228, Percent_Identity=22.8070175438596, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI118766330, Length=228, Percent_Identity=22.8070175438596, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI22749211, Length=231, Percent_Identity=25.1082251082251, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI310123097, Length=233, Percent_Identity=24.0343347639485, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI310110582, Length=233, Percent_Identity=24.0343347639485, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI310131789, Length=233, Percent_Identity=24.0343347639485, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI7706671, Length=253, Percent_Identity=23.3201581027668, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115532692, Length=233, Percent_Identity=27.4678111587983, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI115532690, Length=233, Percent_Identity=27.4678111587983, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147174, Length=165, Percent_Identity=24.2424242424242, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319387, Length=229, Percent_Identity=26.6375545851528, Blast_Score=82, Evalue=8e-17,
Organism=Saccharomyces cerevisiae, GI6321960, Length=161, Percent_Identity=21.7391304347826, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17647755, Length=206, Percent_Identity=28.6407766990291, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24585827, Length=206, Percent_Identity=28.6407766990291, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24585829, Length=206, Percent_Identity=28.6407766990291, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24639187, Length=246, Percent_Identity=24.7967479674797, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24639189, Length=250, Percent_Identity=24.8, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24659892, Length=173, Percent_Identity=21.9653179190751, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24647123, Length=216, Percent_Identity=24.0740740740741, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 29513; Mature: 29382

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTTFDEKLADGIALMESGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIA
CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCEEEECHHHHCCCCCHHHHH
ALKKGLELAPEDLDGITALGDVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAM
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ERTEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHKGIEIDPADATARFN
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCC
LGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYFESYLAREH
HHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCC
SPQAREMIAEVKAVVEGLKEEMRGQ
CCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GTTFDEKLADGIALMESGEYVQAVEAFKGCISLEPENAEGYFYLGEAYSEQGKADDAIA
CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCCEEEECHHHHCCCCCHHHHH
ALKKGLELAPEDLDGITALGDVYFESGKHKDALGCYRKVTELQPKECDGYVSMGLVYNAM
HHHHCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
ERTEDALKSFQKALELDPKNVFALNAMGDLYYGLGENEKAIEAYHKGIEIDPADATARFN
HHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCC
LGELYYDMDDLESAERETLEAVRLDPDFTMSYLTLGNICIDQDRTQEAIKYFESYLAREH
HHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHHCC
SPQAREMIAEVKAVVEGLKEEMRGQ
CCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]