| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is purC
Identifier: 197118888
GI number: 197118888
Start: 2911843
End: 2912733
Strand: Direct
Name: purC
Synonym: Gbem_2511
Alternate gene names: 197118888
Gene position: 2911843-2912733 (Clockwise)
Preceding gene: 197118887
Following gene: 197118889
Centisome position: 63.09
GC content: 60.72
Gene sequence:
>891_bases ATGACTACACCGGTACTCAACACTGATTTCCCCGGTCTGAAGCTCGCCGCCCGCGGCAAGGTGCGCGACATCTACGACCT GGGAGAGACGCTGCTCATCGTCACCACCGACAGGATCTCTGCTTTCGACGTGATCATGAACGAGGGCATCCCGCACAAGG GGTACGTGCTGACCCAGATCTCCGCCTACTGGTTCCGTCAAATGGAAGACATCATCAAGAACCACATCATCTCCACCGAT GTCACCGACTTCCCGAAAGAGTGCCAGCCGTACGCCGACGTCCTGGCCGGGCGCTCCATGTGGGTGAAAAAGGCTAAGCC TTTGGCGGCCGAGTGCATCGTGCGCGGCTACATCTCCGGCTCCGGCTGGAAGGACTACCAAAAGACCGGCGCCATCTGCG GCATCAAGCTTCCGGAAGGGCTCAAGGAATCCGACCGCCTCCCCCAGCCGATCTTCACCCCTTCCACTAAGGCGGAGCTG GGAACCCACGACGAGAACATCTCTTTCGAGGAGATGTGCCGGATCTGCGGCACCGAGATCTCCACCAAGGTGCGCGACGT AACCCTCGCCATCTACGAGAAGGCCCGCGACTTGGCCGACCAGAAAGGGATCATCATCGCCGACACCAAGTTCGAGTACG GCATCTACGACGGCGAGCTGATCATCATCGACGAGTGCATGACACCTGACTCCAGCCGTTTCTGGCCCAAGGAGAGCTAC AAGCCGGGCGGCCCGCAGCCCTCCTTCGACAAGCAGTTCCTGCGTGACTACCTGGAGACGCTCGACTGGGGCAAGACGGC GCCGGCGCCGCCGCTTCCCGAAGAGATCGTCAGGAAGACCGGCGAGAAGTACATGGAAGCGCTGGTGAAGCTGACCGGCA AAGGGATCTAG
Upstream 100 bases:
>100_bases AAATCGACAGCTATTCAAGTGCGAGGTGGAGGGTGCAGGTGCACGCTTCACCTTTCACTTTTAACGCTTGAAGCGCGAAC CATAAAAGGAGAATGGACAA
Downstream 100 bases:
>100_bases GGATCGAACCGATGCCCCGCCTCCTCACCGGGGGCGGGGCTTTTTTTGTGCCGGCAAAGGAAAAAGACGATGCTGAAGCA GACCTTGACCCTGCTGTTTC
Product: phosphoribosylaminoimidazole-succinocarboxamide synthase
Products: NA
Alternate protein names: SAICAR synthetase
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MTTPVLNTDFPGLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPHKGYVLTQISAYWFRQMEDIIKNHIISTD VTDFPKECQPYADVLAGRSMWVKKAKPLAAECIVRGYISGSGWKDYQKTGAICGIKLPEGLKESDRLPQPIFTPSTKAEL GTHDENISFEEMCRICGTEISTKVRDVTLAIYEKARDLADQKGIIIADTKFEYGIYDGELIIIDECMTPDSSRFWPKESY KPGGPQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVKLTGKGI
Sequences:
>Translated_296_residues MTTPVLNTDFPGLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPHKGYVLTQISAYWFRQMEDIIKNHIISTD VTDFPKECQPYADVLAGRSMWVKKAKPLAAECIVRGYISGSGWKDYQKTGAICGIKLPEGLKESDRLPQPIFTPSTKAEL GTHDENISFEEMCRICGTEISTKVRDVTLAIYEKARDLADQKGIIIADTKFEYGIYDGELIIIDECMTPDSSRFWPKESY KPGGPQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVKLTGKGI >Mature_295_residues TTPVLNTDFPGLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPHKGYVLTQISAYWFRQMEDIIKNHIISTDV TDFPKECQPYADVLAGRSMWVKKAKPLAAECIVRGYISGSGWKDYQKTGAICGIKLPEGLKESDRLPQPIFTPSTKAELG THDENISFEEMCRICGTEISTKVRDVTLAIYEKARDLADQKGIIIADTKFEYGIYDGELIIIDECMTPDSSRFWPKESYK PGGPQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVKLTGKGI
Specific function: De novo purine biosynthesis; seventh step. [C]
COG id: COG0152
COG function: function code F; Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SAICAR synthetase family
Homologues:
Organism=Escherichia coli, GI1788820, Length=227, Percent_Identity=25.9911894273128, Blast_Score=62, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6319326, Length=300, Percent_Identity=49, Blast_Score=273, Evalue=3e-74,
Paralogues:
None
Copy number: 1680 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 13,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): PUR7_GEOBB (B5EGN6)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139315.1 - GeneID: 6782508 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2511 - HOGENOM: HBG555040 - OMA: LTLMDEV - ProtClustDB: PRK13961 - HAMAP: MF_00137 - InterPro: IPR013816 - InterPro: IPR001636 - Gene3D: G3DSA:3.30.470.20 - PANTHER: PTHR11609 - TIGRFAMs: TIGR00081
Pfam domain/function: PF01259 SAICAR_synt
EC number: =6.3.2.6
Molecular weight: Translated: 33244; Mature: 33112
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS01057 SAICAR_SYNTHETASE_1; PS01058 SAICAR_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPVLNTDFPGLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPHKGYVLTQI CCCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCEEHHHH SAYWFRQMEDIIKNHIISTDVTDFPKECQPYADVLAGRSMWVKKAKPLAAECIVRGYISG HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCC SGWKDYQKTGAICGIKLPEGLKESDRLPQPIFTPSTKAELGTHDENISFEEMCRICGTEI CCCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHH STKVRDVTLAIYEKARDLADQKGIIIADTKFEYGIYDGELIIIDECMTPDSSRFWPKESY HHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCEECCCEEEEECCCCCCCCCCCCCCCC KPGGPQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVKLTGKGI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTPVLNTDFPGLKLAARGKVRDIYDLGETLLIVTTDRISAFDVIMNEGIPHKGYVLTQI CCCCCCCCCCCCEEECCCCHHHHHHCCCEEEEEEECCHHHHHHHHHCCCCCCCEEHHHH SAYWFRQMEDIIKNHIISTDVTDFPKECQPYADVLAGRSMWVKKAKPLAAECIVRGYISG HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHCCC SGWKDYQKTGAICGIKLPEGLKESDRLPQPIFTPSTKAELGTHDENISFEEMCRICGTEI CCCCHHHHCCCEEEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHH STKVRDVTLAIYEKARDLADQKGIIIADTKFEYGIYDGELIIIDECMTPDSSRFWPKESY HHHHHHHHHHHHHHHHHHHHCCCEEEEECCEECCEECCCEEEEECCCCCCCCCCCCCCCC KPGGPQPSFDKQFLRDYLETLDWGKTAPAPPLPEEIVRKTGEKYMEALVKLTGKGI CCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA