| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118826
Identifier: 197118826
GI number: 197118826
Start: 2840734
End: 2841114
Strand: Reverse
Name: 197118826
Synonym: Gbem_2449
Alternate gene names: NA
Gene position: 2841114-2840734 (Counterclockwise)
Preceding gene: 197118827
Following gene: 197118822
Centisome position: 61.56
GC content: 68.5
Gene sequence:
>381_bases ATGGCCGATCAATTCAAGGAGCAGGGGGCGTTCAGCTGGTTGGAGCTGAGCACGCCGGACCTAGCCGGGTCGCGGGCCTT CTACAGCCGGCTCTTCGGCTGGAAGACCGAGCCTTGGAGCGGAGCGGAGGATTACGCCCTGATCAAGGTGGGGAGCCGCG AGGTGGGTGGGATGACCCCGTTGCGCCCCGGTCAGCGCAAGCCTGCCGGCTGGGGGGCCTACGTGACGGTAACCGACGTG GACGCGACCGCCGCCAAGGCGGAGGAGCTGGGGGGGAAGGTGCTGGTCCCTCCCACGGAGATCACCCGGGTGGGGCGCTT TTGCGTGATACAGGATCCGCAGGGGGCGGTGATCACCGCCATCACCTACCGCCGCCCCTAG
Upstream 100 bases:
>100_bases AAGTGGATCGGCATCCTCTTGGGGCGGGTCGGGTTGCGCTGAGAGGCTCCTCCCATATACTTTGATGCGGCTTGACAGAC CTTTTTAAGGGGGTGATCAA
Downstream 100 bases:
>100_bases CTAGCCTAGGGGAATCTGAACAAAAAAGGGGAGCGCCGCTTGCAGCCGGCGCTCCCCTTTCGTTTGTGTCTCTCCCGAAC CGCAGCTAGATGCCGAGGAT
Product: glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein
Products: NA
Alternate protein names: Glyoxalase Family Protein; Antigen Protein; Doxorubicin Biosynthesis DnrV; Hydroxylase; Antigen; Lactoylglutathione Lyase Family Protein
Number of amino acids: Translated: 126; Mature: 125
Protein sequence:
>126_residues MADQFKEQGAFSWLELSTPDLAGSRAFYSRLFGWKTEPWSGAEDYALIKVGSREVGGMTPLRPGQRKPAGWGAYVTVTDV DATAAKAEELGGKVLVPPTEITRVGRFCVIQDPQGAVITAITYRRP
Sequences:
>Translated_126_residues MADQFKEQGAFSWLELSTPDLAGSRAFYSRLFGWKTEPWSGAEDYALIKVGSREVGGMTPLRPGQRKPAGWGAYVTVTDV DATAAKAEELGGKVLVPPTEITRVGRFCVIQDPQGAVITAITYRRP >Mature_125_residues ADQFKEQGAFSWLELSTPDLAGSRAFYSRLFGWKTEPWSGAEDYALIKVGSREVGGMTPLRPGQRKPAGWGAYVTVTDVD ATAAKAEELGGKVLVPPTEITRVGRFCVIQDPQGAVITAITYRRP
Specific function: Unknown
COG id: COG3324
COG function: function code R; Predicted enzyme related to lactoylglutathione lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13720; Mature: 13589
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADQFKEQGAFSWLELSTPDLAGSRAFYSRLFGWKTEPWSGAEDYALIKVGSREVGGMTP CCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCC LRPGQRKPAGWGAYVTVTDVDATAAKAEELGGKVLVPPTEITRVGRFCVIQDPQGAVITA CCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEECCHHHHHCCCEEEEECCCCCEEEE ITYRRP EEECCC >Mature Secondary Structure ADQFKEQGAFSWLELSTPDLAGSRAFYSRLFGWKTEPWSGAEDYALIKVGSREVGGMTP CCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCC LRPGQRKPAGWGAYVTVTDVDATAAKAEELGGKVLVPPTEITRVGRFCVIQDPQGAVITA CCCCCCCCCCCCEEEEEEECCCHHHHHHHCCCEEEECCHHHHHCCCEEEEECCCCCEEEE ITYRRP EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA