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The map label for this gene is recN [H]

Identifier: 197118821

GI number: 197118821

Start: 2833074

End: 2834735

Strand: Reverse

Name: recN [H]

Synonym: Gbem_2444

Alternate gene names: 197118821

Gene position: 2834735-2833074 (Counterclockwise)

Preceding gene: 197118822

Following gene: 197118820

Centisome position: 61.42

GC content: 65.94

Gene sequence:

>1662_bases
TTGCTGAGAGAACTGCAGATAACGAACCTGGCCATTATCGAGAAGCTGCACGTCGAGTTCGCCCCGGGGCTAAACATCCT
CACCGGCGAGACCGGCGCGGGCAAATCGATCATCATCGACGCGGTTAACCTGATCCTCGGCGGGCGCGCCAGCTCCGATC
TGATACGCTCCGGCGCCAGGGAGGCCTCGGTCGAGGCCGTCTTCGACCTCGCCGGACGCGAGGCTCTGCTGGCCACGCTT
TCCGACGCCGGGATCGATTGCGACGGCGAGCTCCTGGTGCGGCGCGTGGTGCAGCAGGGGGGGAAGAACCGCGTCTTCAT
CGGCGGCGGCCTCGCCACCACCTCGGTCCTCTCGGACCTCTGCCGCAACCTGATCAACATCTACGGCCAGCATGACGCGC
AGACACTCCTTAAGACGGAGAACCACCTGCGCCTTCTGGACGGCTTCGCCGGGTCGCTTTCCCTGCGCGAGGAGTTCGCC
TCCCGTTTCGAGGCCTACCAGGCGGCGAAGAACGAACTGGCGGCGCTGGAAGAAGGGGAGCGCGAGGCCGAGCGGCGGCT
GGACCTCCTGACCTTTCAAAGCGCCGAGATCGGCGACGCGAAGCTCCACCCCGGAGAGGAGGAAGAGCTTGCCGAGGAGC
GGCTGAGGCTCTCGCACAGCGGGAAGCTCCTCTCGGTAAGCCAGCAGGCGTTCGAGACGCTTTACGGCGACGACGCGGCC
CTGCTGGGGGGGCTGCGCCGCATCATCGGGACCGTCGCCGAGGCGGGATCCCTGGACCACGCCCTGGCGCCGGTTGCCGA
GACGCTGGAGGGGGCCTACGCGCAGCTGGAAGACGCGGCGCTCACCCTGCGCGACTACGCCGCGTCGGTCGAGGCGGAGC
CGGGGAGGCTGGAGCAGTTGGAAGACAGGCTTGACGCCATCAACCGTTTGCAGCGAAAATACGGGGCTTCCATCGACGAG
ATCCTCGCCTACCAGCGCGACGTGGATGCCGAGCTTGAGACCCTTGGGAACCGTGAGCAGGCAAAAGGCGAGCTGCAGGA
GAGGATCGCCGTCCTTGAACGAGAGCTCGAACTTTTGGGGGGCAAGCTCTCCAAGGCGCGCGAGAAGGGGGCTGCCGGGC
TGAAGACGGGGATGGAGCGGGAACTCTCCGAGCTCGCCATGAAGAATGCCCTCTTCGAGACCTCCTTCGAGCGCAGCAGC
GAGGCGAGGAACTACGGCTTCGAGCGCTGCGAGTTCCTCTTCTCCCCCAACCCCGGCGAGCCCCCGAAGTCGCTGGCGAA
GATCGCCTCGGGAGGGGAACTTTCCCGGCTCATGCTCGCCTTGAAGCAGCTTCATCCCGACTCCGAGGTTCCGACCCTTA
TCTTCGACGAGGTTGATACCGGGATCGGGGGGGCCACCTCGGCGCTCATAGGCGAGAAGCTGAAGCGGGTGGCCAAGTCA
CAGCAGGTGCTGGCCATAACCCACCTGCCGCAAGTAGCAGCCTTCGCCGATATGCACCTTAAGGTGGAGAAGGGGGTGAG
CGCTGGGCGGACCGCCACCAGCGTCGAGTACCTCGACCCCGAGGCGCGGGTGGCGGAAATAGCGCGCATGCTGGCGGGCG
CGCGGGTCACCGAGAAGACCCTGGAGCACGCCAGGGAGATGATTCAGGAGGCAGTTAGATGA

Upstream 100 bases:

>100_bases
ATCACCAAGGCGGCGCATGTGACCCGCCTGATCCAGTCCCGCAGCAAGGACTACTTCGAGGTCCTGAGGACCAAGCTCAA
ATGGGGCGAGAGGTGAGGCG

Downstream 100 bases:

>100_bases
TCAGAAAGGCAAAGATAAGCGACGTAAAAGAAATCCAGAAGCTCCTCACCAGCTTCGCCAGCCGCGGCGAAATGCTCTCG
CGCTCCCTCTCCGAGTTGTA

Product: DNA repair ATPase RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLRELQITNLAIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAREASVEAVFDLAGREALLATL
SDAGIDCDGELLVRRVVQQGGKNRVFIGGGLATTSVLSDLCRNLINIYGQHDAQTLLKTENHLRLLDGFAGSLSLREEFA
SRFEAYQAAKNELAALEEGEREAERRLDLLTFQSAEIGDAKLHPGEEEELAEERLRLSHSGKLLSVSQQAFETLYGDDAA
LLGGLRRIIGTVAEAGSLDHALAPVAETLEGAYAQLEDAALTLRDYAASVEAEPGRLEQLEDRLDAINRLQRKYGASIDE
ILAYQRDVDAELETLGNREQAKGELQERIAVLERELELLGGKLSKAREKGAAGLKTGMERELSELAMKNALFETSFERSS
EARNYGFERCEFLFSPNPGEPPKSLAKIASGGELSRLMLALKQLHPDSEVPTLIFDEVDTGIGGATSALIGEKLKRVAKS
QQVLAITHLPQVAAFADMHLKVEKGVSAGRTATSVEYLDPEARVAEIARMLAGARVTEKTLEHAREMIQEAVR

Sequences:

>Translated_553_residues
MLRELQITNLAIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAREASVEAVFDLAGREALLATL
SDAGIDCDGELLVRRVVQQGGKNRVFIGGGLATTSVLSDLCRNLINIYGQHDAQTLLKTENHLRLLDGFAGSLSLREEFA
SRFEAYQAAKNELAALEEGEREAERRLDLLTFQSAEIGDAKLHPGEEEELAEERLRLSHSGKLLSVSQQAFETLYGDDAA
LLGGLRRIIGTVAEAGSLDHALAPVAETLEGAYAQLEDAALTLRDYAASVEAEPGRLEQLEDRLDAINRLQRKYGASIDE
ILAYQRDVDAELETLGNREQAKGELQERIAVLERELELLGGKLSKAREKGAAGLKTGMERELSELAMKNALFETSFERSS
EARNYGFERCEFLFSPNPGEPPKSLAKIASGGELSRLMLALKQLHPDSEVPTLIFDEVDTGIGGATSALIGEKLKRVAKS
QQVLAITHLPQVAAFADMHLKVEKGVSAGRTATSVEYLDPEARVAEIARMLAGARVTEKTLEHAREMIQEAVR
>Mature_553_residues
MLRELQITNLAIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAREASVEAVFDLAGREALLATL
SDAGIDCDGELLVRRVVQQGGKNRVFIGGGLATTSVLSDLCRNLINIYGQHDAQTLLKTENHLRLLDGFAGSLSLREEFA
SRFEAYQAAKNELAALEEGEREAERRLDLLTFQSAEIGDAKLHPGEEEELAEERLRLSHSGKLLSVSQQAFETLYGDDAA
LLGGLRRIIGTVAEAGSLDHALAPVAETLEGAYAQLEDAALTLRDYAASVEAEPGRLEQLEDRLDAINRLQRKYGASIDE
ILAYQRDVDAELETLGNREQAKGELQERIAVLERELELLGGKLSKAREKGAAGLKTGMERELSELAMKNALFETSFERSS
EARNYGFERCEFLFSPNPGEPPKSLAKIASGGELSRLMLALKQLHPDSEVPTLIFDEVDTGIGGATSALIGEKLKRVAKS
QQVLAITHLPQVAAFADMHLKVEKGVSAGRTATSVEYLDPEARVAEIARMLAGARVTEKTLEHAREMIQEAVR

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=552, Percent_Identity=36.231884057971, Blast_Score=323, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 60013; Mature: 60013

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRELQITNLAIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAR
CCCCEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
EASVEAVFDLAGREALLATLSDAGIDCDGELLVRRVVQQGGKNRVFIGGGLATTSVLSDL
HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
CRNLINIYGQHDAQTLLKTENHLRLLDGFAGSLSLREEFASRFEAYQAAKNELAALEEGE
HHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAERRLDLLTFQSAEIGDAKLHPGEEEELAEERLRLSHSGKLLSVSQQAFETLYGDDAA
HHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHH
LLGGLRRIIGTVAEAGSLDHALAPVAETLEGAYAQLEDAALTLRDYAASVEAEPGRLEQL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EDRLDAINRLQRKYGASIDEILAYQRDVDAELETLGNREQAKGELQERIAVLERELELLG
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GKLSKAREKGAAGLKTGMERELSELAMKNALFETSFERSSEARNYGFERCEFLFSPNPGE
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCC
PPKSLAKIASGGELSRLMLALKQLHPDSEVPTLIFDEVDTGIGGATSALIGEKLKRVAKS
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHC
QQVLAITHLPQVAAFADMHLKVEKGVSAGRTATSVEYLDPEARVAEIARMLAGARVTEKT
CCEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHH
LEHAREMIQEAVR
HHHHHHHHHHHCC
>Mature Secondary Structure
MLRELQITNLAIIEKLHVEFAPGLNILTGETGAGKSIIIDAVNLILGGRASSDLIRSGAR
CCCCEEHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
EASVEAVFDLAGREALLATLSDAGIDCDGELLVRRVVQQGGKNRVFIGGGLATTSVLSDL
HHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHH
CRNLINIYGQHDAQTLLKTENHLRLLDGFAGSLSLREEFASRFEAYQAAKNELAALEEGE
HHHHHHHHCCCHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REAERRLDLLTFQSAEIGDAKLHPGEEEELAEERLRLSHSGKLLSVSQQAFETLYGDDAA
HHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCHHH
LLGGLRRIIGTVAEAGSLDHALAPVAETLEGAYAQLEDAALTLRDYAASVEAEPGRLEQL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
EDRLDAINRLQRKYGASIDEILAYQRDVDAELETLGNREQAKGELQERIAVLERELELLG
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC
GKLSKAREKGAAGLKTGMERELSELAMKNALFETSFERSSEARNYGFERCEFLFSPNPGE
CHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEECCCCCC
PPKSLAKIASGGELSRLMLALKQLHPDSEVPTLIFDEVDTGIGGATSALIGEKLKRVAKS
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCEEEHHHHCCCCCCHHHHHHHHHHHHHHHC
QQVLAITHLPQVAAFADMHLKVEKGVSAGRTATSVEYLDPEARVAEIARMLAGARVTEKT
CCEEEEHHCHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCHHHHHH
LEHAREMIQEAVR
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]