| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is fbp
Identifier: 197118789
GI number: 197118789
Start: 2789956
End: 2790936
Strand: Reverse
Name: fbp
Synonym: Gbem_2410
Alternate gene names: 197118789
Gene position: 2790936-2789956 (Counterclockwise)
Preceding gene: 197118790
Following gene: 197118788
Centisome position: 60.47
GC content: 60.24
Gene sequence:
>981_bases ATGTCTAATGCACCGGGTACGTCCAAATTCCAAATAGATCTGCGCCGCCATCTGCGTGCCCAGAACATTTGCGATAACCT CGTTCACCTCATGTGCGAAATTGCCGAGGCCAGCAAGTACGTCATCAACGCCGTACGCACCGGTGACCTCGGCGTCGCCG GTACCTCCAACTTGTACGGCGAGGAGCAACTCGCGCTCGACGTACTCTCCGACCGCATCATGCGCAAGCGCCTGATCCAC TCCGGCGTGGTCTGCAACATCGCCTCGGAGGAGATGGACGAGATCTACCAGTGTCAGGCCAGCGCCGACGGCCTCTATTC CGTCGCCTACGATCCGCTTGACGGCTCGTCGCTCGTGGACGTGAACCTTGCGGTAGGTACCATCGTCTCCATCTACGCCG GCTGCGATCTGCTCCAGCCCGGCCGCAATCAGGTCGCCGCCATGTACATCCTCTACGGACCGAGGGTTTCCCTGGTCTAC ACCGTGGGCGACGGGGTGCACGAGTTCACCATGAACAACCTGATGGAGTTCACCCTGACCCGCGAGAACGTCAAGATGGC TCCGGAAGGGAACATCTACGCCCCCGGCGGCCTGCGGAACAAGTACAACGCCGGCGACGAGAAGTTCATCCGCCATCTGG AGGAGAAAGGGTGCAAGCTTCGCTACTCCGGCGGCTTCGTTCCCGATATCAACCAGGTCCTGATGAAGGGGAAAGGGCTC TTCATGTACCCGGCGCTGAACGGTTCCCCCAACGGAAAGCTGCGCGTCCTTTTCGAACTGAACCCCATGGCTTTCATCAT CGAGCATGCCGGCGGCGCCGCCAGCAACGGCAGCATCCCGATCCTCGACATCGTTCCCGAATCGCTCGACCAGAGGGCGC CGATCTACATCGGCTGCAGGGAAGACGTAAAGACCGCGACCTCGTTCGTCAACGGCGGCAAGCAAGAGGTCAAGATGGCA GGCTCATTTGTAAACGGGTAG
Upstream 100 bases:
>100_bases GCTCTGCCTCGCGGTCCGGCCATTTTTTCCTTGATTTATACAGGCATTTGACATACTCTACGTGGCCGTAAAATAATTTT AATTTAATCTGGAGGGAGCC
Downstream 100 bases:
>100_bases AGCTTTGTTGTAAGATGGACCGTCCCGAGGCAACTTTTCCCTAAAGTTGTCTCGGGAAAGGTCGATAGTAATTAATTAGT AATTCTCAGAGGTAACATGA
Product: fructose-1,6-bisphosphatase
Products: NA
Alternate protein names: FBPase class 1; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSNAPGTSKFQIDLRRHLRAQNICDNLVHLMCEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIMRKRLIH SGVVCNIASEEMDEIYQCQASADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYAGCDLLQPGRNQVAAMYILYGPRVSLVY TVGDGVHEFTMNNLMEFTLTRENVKMAPEGNIYAPGGLRNKYNAGDEKFIRHLEEKGCKLRYSGGFVPDINQVLMKGKGL FMYPALNGSPNGKLRVLFELNPMAFIIEHAGGAASNGSIPILDIVPESLDQRAPIYIGCREDVKTATSFVNGGKQEVKMA GSFVNG
Sequences:
>Translated_326_residues MSNAPGTSKFQIDLRRHLRAQNICDNLVHLMCEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIMRKRLIH SGVVCNIASEEMDEIYQCQASADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYAGCDLLQPGRNQVAAMYILYGPRVSLVY TVGDGVHEFTMNNLMEFTLTRENVKMAPEGNIYAPGGLRNKYNAGDEKFIRHLEEKGCKLRYSGGFVPDINQVLMKGKGL FMYPALNGSPNGKLRVLFELNPMAFIIEHAGGAASNGSIPILDIVPESLDQRAPIYIGCREDVKTATSFVNGGKQEVKMA GSFVNG >Mature_325_residues SNAPGTSKFQIDLRRHLRAQNICDNLVHLMCEIAEASKYVINAVRTGDLGVAGTSNLYGEEQLALDVLSDRIMRKRLIHS GVVCNIASEEMDEIYQCQASADGLYSVAYDPLDGSSLVDVNLAVGTIVSIYAGCDLLQPGRNQVAAMYILYGPRVSLVYT VGDGVHEFTMNNLMEFTLTRENVKMAPEGNIYAPGGLRNKYNAGDEKFIRHLEEKGCKLRYSGGFVPDINQVLMKGKGLF MYPALNGSPNGKLRVLFELNPMAFIIEHAGGAASNGSIPILDIVPESLDQRAPIYIGCREDVKTATSFVNGGKQEVKMAG SFVNG
Specific function: INVOLVED IN SEVERAL METABOLIC PATHWAYS. IN E.COLI AND YEAST IT IS NECESSARY FOR GROWTH ON SUBSTANCES SUCH AS GLYCEROL, SUCCINATE AND ACETATE. [C]
COG id: COG0158
COG function: function code G; Fructose-1,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FBPase class 1 family
Homologues:
Organism=Homo sapiens, GI22907028, Length=297, Percent_Identity=38.047138047138, Blast_Score=170, Evalue=1e-42, Organism=Homo sapiens, GI189083692, Length=315, Percent_Identity=35.8730158730159, Blast_Score=165, Evalue=5e-41, Organism=Homo sapiens, GI16579888, Length=315, Percent_Identity=35.8730158730159, Blast_Score=165, Evalue=5e-41, Organism=Escherichia coli, GI1790679, Length=279, Percent_Identity=40.8602150537634, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17508131, Length=336, Percent_Identity=37.202380952381, Blast_Score=202, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6323409, Length=317, Percent_Identity=35.6466876971609, Blast_Score=171, Evalue=1e-43, Organism=Drosophila melanogaster, GI45550998, Length=328, Percent_Identity=35.9756097560976, Blast_Score=177, Evalue=6e-45, Organism=Drosophila melanogaster, GI19921562, Length=328, Percent_Identity=35.9756097560976, Blast_Score=177, Evalue=7e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): F16PA_GEOBB (B5EFV5)
Other databases:
- EMBL: CP001124 - RefSeq: YP_002139216.1 - ProteinModelPortal: B5EFV5 - SMR: B5EFV5 - GeneID: 6782408 - GenomeReviews: CP001124_GR - KEGG: gbm:Gbem_2410 - HOGENOM: HBG731261 - OMA: AMSISPE - ProtClustDB: PRK09293 - GO: GO:0005737 - HAMAP: MF_01855 - InterPro: IPR000146 - InterPro: IPR020548 - InterPro: IPR023079 - PANTHER: PTHR11556 - PRINTS: PR01958
Pfam domain/function: PF00316 FBPase
EC number: =3.1.3.11
Molecular weight: Translated: 35482; Mature: 35351
Theoretical pI: Translated: 5.67; Mature: 5.67
Prosite motif: PS00124 FBPASE
Important sites: BINDING 222-222 BINDING 253-253
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPGTSKFQIDLRRHLRAQNICDNLVHLMCEIAEASKYVINAVRTGDLGVAGTSNLYG CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC EEQLALDVLSDRIMRKRLIHSGVVCNIASEEMDEIYQCQASADGLYSVAYDPLDGSSLVD CHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEE VNLAVGTIVSIYAGCDLLQPGRNQVAAMYILYGPRVSLVYTVGDGVHEFTMNNLMEFTLT EEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHHEEEEE RENVKMAPEGNIYAPGGLRNKYNAGDEKFIRHLEEKGCKLRYSGGFVPDINQVLMKGKGL CCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCE FMYPALNGSPNGKLRVLFELNPMAFIIEHAGGAASNGSIPILDIVPESLDQRAPIYIGCR EEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECH EDVKTATSFVNGGKQEVKMAGSFVNG HHHHHHHHHHCCCHHHHHHCCCCCCC >Mature Secondary Structure SNAPGTSKFQIDLRRHLRAQNICDNLVHLMCEIAEASKYVINAVRTGDLGVAGTSNLYG CCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCC EEQLALDVLSDRIMRKRLIHSGVVCNIASEEMDEIYQCQASADGLYSVAYDPLDGSSLVD CHHHHHHHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEE VNLAVGTIVSIYAGCDLLQPGRNQVAAMYILYGPRVSLVYTVGDGVHEFTMNNLMEFTLT EEHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCHHHHHHHHHHEEEEE RENVKMAPEGNIYAPGGLRNKYNAGDEKFIRHLEEKGCKLRYSGGFVPDINQVLMKGKGL CCCEEECCCCCEECCCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCHHHHHHCCCCE FMYPALNGSPNGKLRVLFELNPMAFIIEHAGGAASNGSIPILDIVPESLDQRAPIYIGCR EEEECCCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEEECH EDVKTATSFVNGGKQEVKMAGSFVNG HHHHHHHHHHCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA