| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is cheW-16 [C]
Identifier: 197118761
GI number: 197118761
Start: 2759087
End: 2759620
Strand: Direct
Name: cheW-16 [C]
Synonym: Gbem_2380
Alternate gene names: 197118761
Gene position: 2759087-2759620 (Clockwise)
Preceding gene: 197118760
Following gene: 197118762
Centisome position: 59.78
GC content: 64.42
Gene sequence:
>534_bases ATGACGGGAAAAGAGGAAGCCTACGACATCCGCAGCATCCTGGGACAGATGCGGGATGAGTACTGGCAGGCGCTTTCCGA AGAGGAGGTGCAGGCCAGGGAAGTGCTGGAGTGCCTGGTCTTTACTTTGGGGGGCGAGCGCTTCGCCTTCGAGACGCAGC ATGCCTGCGAGGTGATCCGGGTACCGAAGCTGATCCGGGTGCCCGCGGTGCAGACGCTTATCGCCGGAATCTTCAACCTG CGCGGCGAGATCACCGCCGCCATGGACATCCGCCCGATGCTGGGGCTCGCCCAGCCCGAGATCGGCGCCGCCGGAAGGAT AGTGGTGGTCAAAAGCGACCGGTTCGCCACCGGCATCCTCATCGAGGCCGCACACGGGGTGCAGGGGCTTTGCTGCGACG GTTTCGAGCCTGCCATGGCGGGAGGGGCGAAGCGTTTCGTCAGGGGGCACTTCAACGAGCAGGACGGCTCCATCATCCTT TTAGACATGGAGGCGCTCCTCGCCGCGCCGGAGATCGTGGTGGGCGAGGGATAA
Upstream 100 bases:
>100_bases TCGGGCGGCCTTACCCGGGCCGTCTGCATGATGCAACTGCAAAACGCCCTGGCGCAGGTCGCCTGAGGCGTTCACCTTTT AGCGGCACAAGGGGTACCAG
Downstream 100 bases:
>100_bases AGCAAAAGGTTTTCCATTTGATTTCAATTTAAACGGGGATGAATATGTCCAACAAGCTATCGGTAAAGATCGTCAGCGTC CTGATCATGGTCATGATCGT
Product: chemotaxis protein CheW
Products: NA
Alternate protein names: Chemotaxis Protein CheW; Chemotaxis Signal Transduction Protein; CheW-Like Protein; Chemotaxis Signal Transduction Coupling Protein; Chemotaxis Signal Transduction Protein CheW; Flagellar FliF M-Ring Protein; Modulation Of CheA Activity In Response Attractants; Chemotaxis Coupling Protein CheW
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MTGKEEAYDIRSILGQMRDEYWQALSEEEVQAREVLECLVFTLGGERFAFETQHACEVIRVPKLIRVPAVQTLIAGIFNL RGEITAAMDIRPMLGLAQPEIGAAGRIVVVKSDRFATGILIEAAHGVQGLCCDGFEPAMAGGAKRFVRGHFNEQDGSIIL LDMEALLAAPEIVVGEG
Sequences:
>Translated_177_residues MTGKEEAYDIRSILGQMRDEYWQALSEEEVQAREVLECLVFTLGGERFAFETQHACEVIRVPKLIRVPAVQTLIAGIFNL RGEITAAMDIRPMLGLAQPEIGAAGRIVVVKSDRFATGILIEAAHGVQGLCCDGFEPAMAGGAKRFVRGHFNEQDGSIIL LDMEALLAAPEIVVGEG >Mature_176_residues TGKEEAYDIRSILGQMRDEYWQALSEEEVQAREVLECLVFTLGGERFAFETQHACEVIRVPKLIRVPAVQTLIAGIFNLR GEITAAMDIRPMLGLAQPEIGAAGRIVVVKSDRFATGILIEAAHGVQGLCCDGFEPAMAGGAKRFVRGHFNEQDGSIILL DMEALLAAPEIVVGEG
Specific function: Involved In The Transmission Of Sensory Signals From The Chemoreceptors To The Flagellar Motors. It Physically Bridges Chea To The Mcps (Methyl-Accepting Chemotaxis Proteins) To Allow Regulated Phosphotransfer To Chey And Cheb. [C]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19229; Mature: 19097
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKEEAYDIRSILGQMRDEYWQALSEEEVQAREVLECLVFTLGGERFAFETQHACEVIR CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH VPKLIRVPAVQTLIAGIFNLRGEITAAMDIRPMLGLAQPEIGAAGRIVVVKSDRFATGIL CCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCEEEEEECCCCEEEEE IEAAHGVQGLCCDGFEPAMAGGAKRFVRGHFNEQDGSIILLDMEALLAAPEIVVGEG EEECCCCCCEECCCCCHHHHCCHHHHHHCCCCCCCCCEEEEEHHHHHCCCCEEECCC >Mature Secondary Structure TGKEEAYDIRSILGQMRDEYWQALSEEEVQAREVLECLVFTLGGERFAFETQHACEVIR CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHH VPKLIRVPAVQTLIAGIFNLRGEITAAMDIRPMLGLAQPEIGAAGRIVVVKSDRFATGIL CCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHCCCCCCCCCCCEEEEEECCCCEEEEE IEAAHGVQGLCCDGFEPAMAGGAKRFVRGHFNEQDGSIILLDMEALLAAPEIVVGEG EEECCCCCCEECCCCCHHHHCCHHHHHHCCCCCCCCCEEEEEHHHHHCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA