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The map label for this gene is bscR [H]

Identifier: 197118752

GI number: 197118752

Start: 2750309

End: 2750881

Strand: Reverse

Name: bscR [H]

Synonym: Gbem_2371

Alternate gene names: 197118752

Gene position: 2750881-2750309 (Counterclockwise)

Preceding gene: 197118753

Following gene: 197118751

Centisome position: 59.61

GC content: 60.21

Gene sequence:

>573_bases
ATGGAAAAGTGTGACAAGCGAGACCTGATAGTCCGGGCAGCGCTGGAACTGGTCGCGGAGCAGGGGTTCCATGGCGCGCC
TATGGCGATGATCGCCGACAAGGCGGGGGTCGGGGCAGGGACCATCTACCGCTACTTCGAGAACAAGGATGCGCTGATCA
GGGGCATCTACTGCATGGTGGAAGCGCGGGTGGTGGCAGCGATCCTGAAAGACTACCCCGACAACGGTCCGGTGCGCGAG
CGTTTCATGCACTTCGGCACCGTGCTGGTCAACTACCTGGCCTCCGCTCCGCTGGAGCTGCGTTTCGTCGAGCAGTTTCA
CAACTCCCCGTTCGGCGTGGATCATCGCCGGGAGAAGATCTTCGGCAAGGGGGAGAAGGACATCATCAGCGAGCTGTTCC
AGGAGGCGATCGAGCAGCAGATCTTTAAACCCCTTCCGCTGTCGATCCTTTTCGCCCTGTTCTTCTCGCCACTCATCGAC
GTTTGCCGCGATCAGATCCTTGGTTTCATCAACCTTGACCAGGAGCTGATTGAGCAGACCGTCGGCGCCTGCTGGGACGC
CGTTCGCAGGTAG

Upstream 100 bases:

>100_bases
TATTATTTTTTAATTCTCGGCAAAGAGTAAACAGTCTTGACAAAGAATCGGCAACGGATTTATAAGGAATGAAGGTTCAT
TCCGCATTAAGGGAGTCAGG

Downstream 100 bases:

>100_bases
TGAATGAACATTCATTTTGGGGGGCTGAGCCGAAACATGCTGATGAAAATCTTCCTATTCCTGATTGCCCTGACCTGGGG
CGGCATCATCGTTGTCGCCT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MEKCDKRDLIVRAALELVAEQGFHGAPMAMIADKAGVGAGTIYRYFENKDALIRGIYCMVEARVVAAILKDYPDNGPVRE
RFMHFGTVLVNYLASAPLELRFVEQFHNSPFGVDHRREKIFGKGEKDIISELFQEAIEQQIFKPLPLSILFALFFSPLID
VCRDQILGFINLDQELIEQTVGACWDAVRR

Sequences:

>Translated_190_residues
MEKCDKRDLIVRAALELVAEQGFHGAPMAMIADKAGVGAGTIYRYFENKDALIRGIYCMVEARVVAAILKDYPDNGPVRE
RFMHFGTVLVNYLASAPLELRFVEQFHNSPFGVDHRREKIFGKGEKDIISELFQEAIEQQIFKPLPLSILFALFFSPLID
VCRDQILGFINLDQELIEQTVGACWDAVRR
>Mature_190_residues
MEKCDKRDLIVRAALELVAEQGFHGAPMAMIADKAGVGAGTIYRYFENKDALIRGIYCMVEARVVAAILKDYPDNGPVRE
RFMHFGTVLVNYLASAPLELRFVEQFHNSPFGVDHRREKIFGKGEKDIISELFQEAIEQQIFKPLPLSILFALFFSPLID
VCRDQILGFINLDQELIEQTVGACWDAVRR

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21567; Mature: 21567

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKCDKRDLIVRAALELVAEQGFHGAPMAMIADKAGVGAGTIYRYFENKDALIRGIYCMV
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH
EARVVAAILKDYPDNGPVRERFMHFGTVLVNYLASAPLELRFVEQFHNSPFGVDHRREKI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHH
FGKGEKDIISELFQEAIEQQIFKPLPLSILFALFFSPLIDVCRDQILGFINLDQELIEQT
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGACWDAVRR
HHHHHHHHCC
>Mature Secondary Structure
MEKCDKRDLIVRAALELVAEQGFHGAPMAMIADKAGVGAGTIYRYFENKDALIRGIYCMV
CCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHH
EARVVAAILKDYPDNGPVRERFMHFGTVLVNYLASAPLELRFVEQFHNSPFGVDHRREKI
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHH
FGKGEKDIISELFQEAIEQQIFKPLPLSILFALFFSPLIDVCRDQILGFINLDQELIEQT
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VGACWDAVRR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]