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The map label for this gene is vacJ [C]

Identifier: 197118744

GI number: 197118744

Start: 2740655

End: 2741443

Strand: Reverse

Name: vacJ [C]

Synonym: Gbem_2363

Alternate gene names: 197118744

Gene position: 2741443-2740655 (Counterclockwise)

Preceding gene: 197118745

Following gene: 197118743

Centisome position: 59.4

GC content: 62.23

Gene sequence:

>789_bases
ATGAAAACGCGATGCGGAGCCACTATGCTGATCGCGGGAGCCGTATTGGCGCTCGTGCTGGAATCCGGCTGCAGCACGCT
TCCCCAGGCTGGCCCCGGGCCGGTCGAGCCGCCGCTGCGCAGGTACGAGGACCTGGTCAAGCCGGGGACGCACAACATGC
TCGACGTGAAGGACTCGGTCGAGGGGTTCAACCGGGGGAGCTACCGCTTCAACTACTACTTCGACGAGTATCTCTACCGC
CCCGTGGTGCGCGGCTACGAGATCATCGTGCCCAACTACCTGGAGGACCGGGTATCGAGCGCCATCGACAACCTGAACGA
GATTACGAACTTGACAAACAACCTGTTCCAGTTCAAGTTCAAGGCCGCCGGGGTTACCCTCGGCCGCTTCCTGATCAACT
CCACGGTCGGTGTCGCCGGCTTGTGGGACCCTGCCACGACCTGGGGGCTGGAACGGAAAACGCAGGATTTCGGCCTCACC
CTGGGGCATTACGGAACCGGCGACGGCTCGTACCTGATGCTGCCGGTCCTCGGGGCTTCCAACGTCCGGGACACCGGAGG
GTTTGCGGCGGATACCGCAACCTTCGTCTACGCCGGACCGATTGCCTGGGCCAACAGCAGCACCTTCACCACGGCCTATA
CCGGCGTCAACGCGGTGGACCGGCGGCACCGGATTCCTTTCCGTTACCGCCAGACCGGGTCTCCCTTCGAGTACGAGTTG
TTGCGGACGCTTTACACCATGAAAAGGGATTACGACGTGCAGCAAGGCAAGGGTAAGGGCAAAGATTGA

Upstream 100 bases:

>100_bases
GGGCGCGGATCTATCCCAGCGGCGGCCACATGGGGAACATGTTCCACCCGAGCGTGGTCTCTTCCATGGTCGAGCTTCTT
TCCGGCAAGGAGGTGGCGCA

Downstream 100 bases:

>100_bases
ACCTGCGCTTTAGCGGCGCCAGGTTGGAGGTAGCAGTTGTTGAGGTTCTTAAAATCGATTTTCGGCAGCAAGCGGAAGCT
GGGAGGGGTTCCCGAATCCC

Product: VacJ family lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MKTRCGATMLIAGAVLALVLESGCSTLPQAGPGPVEPPLRRYEDLVKPGTHNMLDVKDSVEGFNRGSYRFNYYFDEYLYR
PVVRGYEIIVPNYLEDRVSSAIDNLNEITNLTNNLFQFKFKAAGVTLGRFLINSTVGVAGLWDPATTWGLERKTQDFGLT
LGHYGTGDGSYLMLPVLGASNVRDTGGFAADTATFVYAGPIAWANSSTFTTAYTGVNAVDRRHRIPFRYRQTGSPFEYEL
LRTLYTMKRDYDVQQGKGKGKD

Sequences:

>Translated_262_residues
MKTRCGATMLIAGAVLALVLESGCSTLPQAGPGPVEPPLRRYEDLVKPGTHNMLDVKDSVEGFNRGSYRFNYYFDEYLYR
PVVRGYEIIVPNYLEDRVSSAIDNLNEITNLTNNLFQFKFKAAGVTLGRFLINSTVGVAGLWDPATTWGLERKTQDFGLT
LGHYGTGDGSYLMLPVLGASNVRDTGGFAADTATFVYAGPIAWANSSTFTTAYTGVNAVDRRHRIPFRYRQTGSPFEYEL
LRTLYTMKRDYDVQQGKGKGKD
>Mature_262_residues
MKTRCGATMLIAGAVLALVLESGCSTLPQAGPGPVEPPLRRYEDLVKPGTHNMLDVKDSVEGFNRGSYRFNYYFDEYLYR
PVVRGYEIIVPNYLEDRVSSAIDNLNEITNLTNNLFQFKFKAAGVTLGRFLINSTVGVAGLWDPATTWGLERKTQDFGLT
LGHYGTGDGSYLMLPVLGASNVRDTGGFAADTATFVYAGPIAWANSSTFTTAYTGVNAVDRRHRIPFRYRQTGSPFEYEL
LRTLYTMKRDYDVQQGKGKGKD

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=213, Percent_Identity=30.5164319248826, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 29065; Mature: 29065

Theoretical pI: Translated: 8.55; Mature: 8.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTRCGATMLIAGAVLALVLESGCSTLPQAGPGPVEPPLRRYEDLVKPGTHNMLDVKDSV
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHH
EGFNRGSYRFNYYFDEYLYRPVVRGYEIIVPNYLEDRVSSAIDNLNEITNLTNNLFQFKF
CCCCCCCEEEEEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEH
KAAGVTLGRFLINSTVGVAGLWDPATTWGLERKTQDFGLTLGHYGTGDGSYLMLPVLGAS
HHCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCEEECCCCCCCCCEEEEEECCCC
NVRDTGGFAADTATFVYAGPIAWANSSTFTTAYTGVNAVDRRHRIPFRYRQTGSPFEYEL
CCCCCCCCCCCCEEEEEECCEEECCCCCEEEEECCCHHHHHHHCCCEEECCCCCCHHHHH
LRTLYTMKRDYDVQQGKGKGKD
HHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MKTRCGATMLIAGAVLALVLESGCSTLPQAGPGPVEPPLRRYEDLVKPGTHNMLDVKDSV
CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHH
EGFNRGSYRFNYYFDEYLYRPVVRGYEIIVPNYLEDRVSSAIDNLNEITNLTNNLFQFKF
CCCCCCCEEEEEEHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEH
KAAGVTLGRFLINSTVGVAGLWDPATTWGLERKTQDFGLTLGHYGTGDGSYLMLPVLGAS
HHCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHCEEECCCCCCCCCEEEEEECCCC
NVRDTGGFAADTATFVYAGPIAWANSSTFTTAYTGVNAVDRRHRIPFRYRQTGSPFEYEL
CCCCCCCCCCCCEEEEEECCEEECCCCCEEEEECCCHHHHHHHCCCEEECCCCCCHHHHH
LRTLYTMKRDYDVQQGKGKGKD
HHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA