| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197118728
Identifier: 197118728
GI number: 197118728
Start: 2725670
End: 2726305
Strand: Reverse
Name: 197118728
Synonym: Gbem_2347
Alternate gene names: NA
Gene position: 2726305-2725670 (Counterclockwise)
Preceding gene: 197118729
Following gene: 197118727
Centisome position: 59.07
GC content: 59.59
Gene sequence:
>636_bases ATGAGATCATCCGGCTACAAGCGCGCGAGCTATCTCGCCCTGTTCACTATTTTCTACAACGTCCTAGAAGGTCTCGTATC CATGTGGATAGGGGCAGCCGACGAGACGCTGGCGCTCTTCGGCTTCGGGGCCGACTCGTTCATAGAGGTCATCTCCGCGG TGGGCGTCTGGCACATGCTGCAGCGGATCAGGGCGAATGGTGGGGAGAGCCGCGACGAGTTCGAGCAGCGCGCCCTGAAG ATCACCGGCGTCTCCTTCTACCTGCTGACGGCAGGGCTCGTGGCGACCGCTTTCCTCAACCTCTACCAGCACCATAAGCC GGACACCACCTTTTGGGGCGTCGTCGTCTCCCTGGTCTCCGTCTCTTTCATGTGGTACCTCATCCGGCAGAAGACCGCCG TGGGGATAGCGCTCAATTCGCCTGCGATTATGGCCGACGCCGCTTGTTCCCGCGCCTGCCTGTACTTCTCCCTGGCTTTG TTGGTCTCCAGTGCAGGATACGAACTGACCGGTGTCGGAAGCCTGGATGCCATTGGAGCCATGCTCATCGGGTACCTGAG TTTCAAGGAAGGAAGGGAGGCTTTTGCCAAAGCCAAGGGGATGTCATGTTCCTGCGGTTGCAGTTGCAGCCCATAG
Upstream 100 bases:
>100_bases ATCCCTCTGTGCTGCAGGGGACAGATGAGGAAAAACTGTCCGCGATCCGCAGCATAAGGGACGCCATCAAAGAAAAGGTT AAAACCTGGAGTGTCACGGT
Downstream 100 bases:
>100_bases TTCATCCTTCAGTTGATCTGATTCTGCCGCGCCATGCTGTAGCAGCACTTCCCTTAGTTGCCACCCCTGTGGCGTTCCCC GCAGTACCCCCCCCCTGAAG
Product: membrane protein
Products: NA
Alternate protein names: Integral Membrane Protein; Co/Zn/Cd Cation Transporter-Like Protein; Cation Efflux Family Protein; Co/Zn/Cd Cation Transporter; Co/Zn/Cd Cation Transporters-Like Protein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP
Sequences:
>Translated_211_residues MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP >Mature_211_residues MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHMLQRIRANGGESRDEFEQRALK ITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVSVSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLAL LVSSAGYELTGVGSLDAIGAMLIGYLSFKEGREAFAKAKGMSCSCGCSCSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22772; Mature: 22772
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHH QRIRANGGESRDEFEQRALKITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLALLVSSAGYELTGVGSLDAIGA HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH MLIGYLSFKEGREAFAKAKGMSCSCGCSCSP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRSSGYKRASYLALFTIFYNVLEGLVSMWIGAADETLALFGFGADSFIEVISAVGVWHML CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEEECCHHHHHHHHHHHHHHHHH QRIRANGGESRDEFEQRALKITGVSFYLLTAGLVATAFLNLYQHHKPDTTFWGVVVSLVS HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH VSFMWYLIRQKTAVGIALNSPAIMADAACSRACLYFSLALLVSSAGYELTGVGSLDAIGA HHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHH MLIGYLSFKEGREAFAKAKGMSCSCGCSCSP HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA