| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is yecE [C]
Identifier: 197118706
GI number: 197118706
Start: 2697917
End: 2698651
Strand: Direct
Name: yecE [C]
Synonym: Gbem_2325
Alternate gene names: 197118706
Gene position: 2697917-2698651 (Clockwise)
Preceding gene: 197118705
Following gene: 197118717
Centisome position: 58.46
GC content: 57.14
Gene sequence:
>735_bases ATGGCAAAGCTAAACCTGGGGTGCAGCGGTTTCAGCTACAAGCATTGGCGGGGCAACTTCTATCCGGACGACGTCTCGCA AAAGGCGTGGTTCGCCTTCTACCGCTCGGTCTTTGCTACGGTCGAGTTAAACGTAACCTTCTACCGCATCCCCACGCAGG AAACCTTCAGGCACTGGTACGAGCAAAGCGGCAAGAACTTCTCGTTTGCCGTCAAGGGGAGCCGGTACATCACCCACATA AAAAGGCTGGTGGACGTCGAGAGCGCGCTGGCCAGATTCTTCGGAGCCGCGCAAGAGCTTCAGGAGAAATTGCAGGTGGT ACTTTGGCAGTTCCCGCCGCAATTCAAAGCGGATCTTCCCGCGCTGGAAAGATTTCTGGATCAGGTGGCGCAGTATCACG TCAGAAACACGCTTGAATTCAGGAACCAGAGCTGGCTCACCGACGAAGTGGTAGCCCTTTGCAAGAGCCGCAACATCTCA CTGTGCATGGCGGACCACCCCCCGTTCATCGACACCCTCCCCGTCACGGCGGACTTCGTCTACATCCGCAGGCACGGCAT GGAGGGGAGCTACAACGGGTTCTATACGAGCGAACAGCTGGAAAAGGATGCGGCGAGGATCAGGAGCTACCTGGACCGGC AGCTCGACGTGTACATCTATTACAACAACGACATGGGCGGAGCTGCACCCCAGAACGCGCAGGAACTGGCTTCCATGCTG AAGGAACCCGACTAG
Upstream 100 bases:
>100_bases TCGTGACGCCCGAAAACGCGAGCTACGTAGCCCCGGTGATCGGGCCGGACTGGCTGGGACTAAGGTGGGAACGATCCTTC TAAACCAGGGGGGAAAGGAC
Downstream 100 bases:
>100_bases GCCCCGCCTCCCCCAGAGCTAAATCCCCCCCGTCCCCCCTTCTCAAAGGGGTGAGCACAATAGCAACTCCTCCACAAAGA GGGGAAAGGTAATTCCTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MAKLNLGCSGFSYKHWRGNFYPDDVSQKAWFAFYRSVFATVELNVTFYRIPTQETFRHWYEQSGKNFSFAVKGSRYITHI KRLVDVESALARFFGAAQELQEKLQVVLWQFPPQFKADLPALERFLDQVAQYHVRNTLEFRNQSWLTDEVVALCKSRNIS LCMADHPPFIDTLPVTADFVYIRRHGMEGSYNGFYTSEQLEKDAARIRSYLDRQLDVYIYYNNDMGGAAPQNAQELASML KEPD
Sequences:
>Translated_244_residues MAKLNLGCSGFSYKHWRGNFYPDDVSQKAWFAFYRSVFATVELNVTFYRIPTQETFRHWYEQSGKNFSFAVKGSRYITHI KRLVDVESALARFFGAAQELQEKLQVVLWQFPPQFKADLPALERFLDQVAQYHVRNTLEFRNQSWLTDEVVALCKSRNIS LCMADHPPFIDTLPVTADFVYIRRHGMEGSYNGFYTSEQLEKDAARIRSYLDRQLDVYIYYNNDMGGAAPQNAQELASML KEPD >Mature_243_residues AKLNLGCSGFSYKHWRGNFYPDDVSQKAWFAFYRSVFATVELNVTFYRIPTQETFRHWYEQSGKNFSFAVKGSRYITHIK RLVDVESALARFFGAAQELQEKLQVVLWQFPPQFKADLPALERFLDQVAQYHVRNTLEFRNQSWLTDEVVALCKSRNISL CMADHPPFIDTLPVTADFVYIRRHGMEGSYNGFYTSEQLEKDAARIRSYLDRQLDVYIYYNNDMGGAAPQNAQELASMLK EPD
Specific function: Unknown
COG id: COG1801
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28452; Mature: 28321
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKLNLGCSGFSYKHWRGNFYPDDVSQKAWFAFYRSVFATVELNVTFYRIPTQETFRHWY CCEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHH EQSGKNFSFAVKGSRYITHIKRLVDVESALARFFGAAQELQEKLQVVLWQFPPQFKADLP HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ALERFLDQVAQYHVRNTLEFRNQSWLTDEVVALCKSRNISLCMADHPPFIDTLPVTADFV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH YIRRHGMEGSYNGFYTSEQLEKDAARIRSYLDRQLDVYIYYNNDMGGAAPQNAQELASML EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH KEPD CCCC >Mature Secondary Structure AKLNLGCSGFSYKHWRGNFYPDDVSQKAWFAFYRSVFATVELNVTFYRIPTQETFRHWY CEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHHHH EQSGKNFSFAVKGSRYITHIKRLVDVESALARFFGAAQELQEKLQVVLWQFPPQFKADLP HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH ALERFLDQVAQYHVRNTLEFRNQSWLTDEVVALCKSRNISLCMADHPPFIDTLPVTADFV HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHH YIRRHGMEGSYNGFYTSEQLEKDAARIRSYLDRQLDVYIYYNNDMGGAAPQNAQELASML EEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHH KEPD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA