Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118685

Identifier: 197118685

GI number: 197118685

Start: 2677946

End: 2678611

Strand: Direct

Name: 197118685

Synonym: Gbem_2304

Alternate gene names: NA

Gene position: 2677946-2678611 (Clockwise)

Preceding gene: 197118659

Following gene: 197118692

Centisome position: 58.03

GC content: 58.41

Gene sequence:

>666_bases
ATGAGACAACCGAACCCGATTCATTTAGTTTTAGTGGTGGGATTTGTCTTTTCGAGCCTTTGCCTCGCCGGGTGCGCCGG
AGGCCGGTTCACTTTCCGTGCGAACAACAGCGCCTCGCTGCAGACGGTGGAGGCGGATCTCGAATACGCCCGTTTGCAGG
CAGAGAACACCCGCGAGGCGCTGGATGAACTGGTGTTCGCCAATCCCCCCGACCTGGAGCGCGCCTATCGGGATTTTGCC
GACAAGGCGATGAGTATGAACCTGGTTGGAGAGCGGTTGGTGAGACATGCCGACAGCATGGAGTACCAGGGAAGCAGTTA
CTTGGTAGAGCCGGAAAAATCGGCGACAGAGTGCCAATTCCCGCGACTGTCCAACACGGGGAGGACGAAGCCTTTGGAGT
TGGGGCCGGCGTTCGATCCGATTGCAGCCAAAGCTATTTCGGTCCGCCGCGCTTACCGGGCATACGAGTCGGACCTGAGC
AACATCAGGTCGATCCTCTCCACCCACCAGACCACGAAAGGGATCGAGGTGGTAGATATTTTCATCAAGAAAGCAGCGGT
AGACGAGGAGAGTCTGACCGAGGCGCTGGAGCAAGCGCAAGCTTTGGTGCAGGATGCAGAAAAAGCAGCGGCGACACCTC
TGCCGGATGGGGGGGAGACGCGTTAG

Upstream 100 bases:

>100_bases
AGAAATAAAAACACTTGGAATCTAGCAAGTTAAGACACATTGACAGCATAGACACCTTAAGTAACATTAACCAATCGCAA
AATCATAACAGGAGCGTGTC

Downstream 100 bases:

>100_bases
AATCGCGGTTTTTGGTCGTCGTTGAGGGGAAGCTGGCAGTGCAGGCACCTGCGCAGATAGAGCAAGATCATCCCGTGCAC
ATGGTAGTAGTTGCCGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRQPNPIHLVLVVGFVFSSLCLAGCAGGRFTFRANNSASLQTVEADLEYARLQAENTREALDELVFANPPDLERAYRDFA
DKAMSMNLVGERLVRHADSMEYQGSSYLVEPEKSATECQFPRLSNTGRTKPLELGPAFDPIAAKAISVRRAYRAYESDLS
NIRSILSTHQTTKGIEVVDIFIKKAAVDEESLTEALEQAQALVQDAEKAAATPLPDGGETR

Sequences:

>Translated_221_residues
MRQPNPIHLVLVVGFVFSSLCLAGCAGGRFTFRANNSASLQTVEADLEYARLQAENTREALDELVFANPPDLERAYRDFA
DKAMSMNLVGERLVRHADSMEYQGSSYLVEPEKSATECQFPRLSNTGRTKPLELGPAFDPIAAKAISVRRAYRAYESDLS
NIRSILSTHQTTKGIEVVDIFIKKAAVDEESLTEALEQAQALVQDAEKAAATPLPDGGETR
>Mature_221_residues
MRQPNPIHLVLVVGFVFSSLCLAGCAGGRFTFRANNSASLQTVEADLEYARLQAENTREALDELVFANPPDLERAYRDFA
DKAMSMNLVGERLVRHADSMEYQGSSYLVEPEKSATECQFPRLSNTGRTKPLELGPAFDPIAAKAISVRRAYRAYESDLS
NIRSILSTHQTTKGIEVVDIFIKKAAVDEESLTEALEQAQALVQDAEKAAATPLPDGGETR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24268; Mature: 24268

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQPNPIHLVLVVGFVFSSLCLAGCAGGRFTFRANNSASLQTVEADLEYARLQAENTREA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LDELVFANPPDLERAYRDFADKAMSMNLVGERLVRHADSMEYQGSSYLVEPEKSATECQF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCC
PRLSNTGRTKPLELGPAFDPIAAKAISVRRAYRAYESDLSNIRSILSTHQTTKGIEVVDI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FIKKAAVDEESLTEALEQAQALVQDAEKAAATPLPDGGETR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRQPNPIHLVLVVGFVFSSLCLAGCAGGRFTFRANNSASLQTVEADLEYARLQAENTREA
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LDELVFANPPDLERAYRDFADKAMSMNLVGERLVRHADSMEYQGSSYLVEPEKSATECQF
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCC
PRLSNTGRTKPLELGPAFDPIAAKAISVRRAYRAYESDLSNIRSILSTHQTTKGIEVVDI
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FIKKAAVDEESLTEALEQAQALVQDAEKAAATPLPDGGETR
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA