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The map label for this gene is scpA [H]

Identifier: 197118678

GI number: 197118678

Start: 2668387

End: 2669244

Strand: Reverse

Name: scpA [H]

Synonym: Gbem_2297

Alternate gene names: 197118678

Gene position: 2669244-2668387 (Counterclockwise)

Preceding gene: 197118679

Following gene: 197118677

Centisome position: 57.84

GC content: 60.26

Gene sequence:

>858_bases
TTGTCGCTGGATACGATGCAAAGCAACCTTTTTTCTGACGCTCTGGAGCAGTCGTACCGGGTTCAGATCGAGGAGTTCGA
GGGTCCGCTCGATCTCTTGCTCCACCTCATCAAGAAGAACGAGGTGGACATCTACAACATCCCCATCGCCGCCATTACCA
GGCAGTACCTGGAATACATGGAACTGATGAAGGAGCTGAACCTGGATATCGCTGGGGAGTTCCTGGTCATGGCGGCGACG
CTCCTGCAGATAAAGTCGCGCATGCTGCTTCCGGCGACCCAGGAGGAGGACGGGGAGGCCGAGGTGGAGGACCCGCGCGC
CGAACTGGTCCGCCGGCTCCTCGAGTACCAGCGCTACCGCGACGCTTCACAGCTTCTCTCCGCCCGTAACCTCCTCGGGC
GCGACGTCTTCGCCAGAACCTTCGATTCGCCGGAACTGGCAGAGATGGAGCCGCAGGAGGAACCTGCCGACGTCGAGCTC
TTCGAGCTGATCGAGGCGTTCCAGCGCGTGCTGGCGCGGGTTTCGGTCGATACCTTCCATGACGTCGTGGCTGACGGCAT
CTCCATCGCCGACCGCATCGGCGTGGTGCTCTCGGTTCTGCATGCGGAAAAGACGGTCTGCTTCGACGCCCTCTTTACCA
CCGGGATGACGCGCGACCTTTTGGTGGTCACCTTCCTTTCCATTCTGGAACTGGCCAAGATGAAGCTGATCAGGGTTGTC
CAGGTCGAAAGCCTCGGTTCCATCTGGCTGACCCTCAGCGCGGATCAGCAGGAGAGCGGGCTCGAGCAGGAAGGCGGGGA
GCCGCAAGTGGAAAACCAGAACAGTTTGGAATCAGCGGAGGATGCAGTTGTCGGGTAA

Upstream 100 bases:

>100_bases
TGTCACCAAAGCCGCTCGAACGTAGAACGTAGAACGTTGAACCGTTTTCCCGCTGCTCGAACGTTGAACATTGGACGTTG
AACGGCCTTTAGGAGATTTC

Downstream 100 bases:

>100_bases
GCCCTTGAAATCGATCGTAGAGAGCCTCCTGTTCGTGTACGACCAGCCGCTTTCGCTGGACCGGCTCGCCCTGATCCTCG
AGGAATTCGAGCGGAGCGAT

Product: chromosome segregation/condensation protein ScpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MSLDTMQSNLFSDALEQSYRVQIEEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLEYMELMKELNLDIAGEFLVMAAT
LLQIKSRMLLPATQEEDGEAEVEDPRAELVRRLLEYQRYRDASQLLSARNLLGRDVFARTFDSPELAEMEPQEEPADVEL
FELIEAFQRVLARVSVDTFHDVVADGISIADRIGVVLSVLHAEKTVCFDALFTTGMTRDLLVVTFLSILELAKMKLIRVV
QVESLGSIWLTLSADQQESGLEQEGGEPQVENQNSLESAEDAVVG

Sequences:

>Translated_285_residues
MSLDTMQSNLFSDALEQSYRVQIEEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLEYMELMKELNLDIAGEFLVMAAT
LLQIKSRMLLPATQEEDGEAEVEDPRAELVRRLLEYQRYRDASQLLSARNLLGRDVFARTFDSPELAEMEPQEEPADVEL
FELIEAFQRVLARVSVDTFHDVVADGISIADRIGVVLSVLHAEKTVCFDALFTTGMTRDLLVVTFLSILELAKMKLIRVV
QVESLGSIWLTLSADQQESGLEQEGGEPQVENQNSLESAEDAVVG
>Mature_284_residues
SLDTMQSNLFSDALEQSYRVQIEEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLEYMELMKELNLDIAGEFLVMAATL
LQIKSRMLLPATQEEDGEAEVEDPRAELVRRLLEYQRYRDASQLLSARNLLGRDVFARTFDSPELAEMEPQEEPADVELF
ELIEAFQRVLARVSVDTFHDVVADGISIADRIGVVLSVLHAEKTVCFDALFTTGMTRDLLVVTFLSILELAKMKLIRVVQ
VESLGSIWLTLSADQQESGLEQEGGEPQVENQNSLESAEDAVVG

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 32097; Mature: 31966

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDTMQSNLFSDALEQSYRVQIEEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLEYM
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
ELMKELNLDIAGEFLVMAATLLQIKSRMLLPATQEEDGEAEVEDPRAELVRRLLEYQRYR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
DASQLLSARNLLGRDVFARTFDSPELAEMEPQEEPADVELFELIEAFQRVLARVSVDTFH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DVVADGISIADRIGVVLSVLHAEKTVCFDALFTTGMTRDLLVVTFLSILELAKMKLIRVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QVESLGSIWLTLSADQQESGLEQEGGEPQVENQNSLESAEDAVVG
HHHCCCCEEEEEECCCHHCCCHHCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SLDTMQSNLFSDALEQSYRVQIEEFEGPLDLLLHLIKKNEVDIYNIPIAAITRQYLEYM
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHH
ELMKELNLDIAGEFLVMAATLLQIKSRMLLPATQEEDGEAEVEDPRAELVRRLLEYQRYR
HHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
DASQLLSARNLLGRDVFARTFDSPELAEMEPQEEPADVELFELIEAFQRVLARVSVDTFH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
DVVADGISIADRIGVVLSVLHAEKTVCFDALFTTGMTRDLLVVTFLSILELAKMKLIRVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
QVESLGSIWLTLSADQQESGLEQEGGEPQVENQNSLESAEDAVVG
HHHCCCCEEEEEECCCHHCCCHHCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA