Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118643

Identifier: 197118643

GI number: 197118643

Start: 2631105

End: 2631563

Strand: Reverse

Name: 197118643

Synonym: Gbem_2262

Alternate gene names: NA

Gene position: 2631563-2631105 (Counterclockwise)

Preceding gene: 197118644

Following gene: 197118641

Centisome position: 57.02

GC content: 56.86

Gene sequence:

>459_bases
ATGTTGACGCAGTGGCGTGATGAAATGATTACGGGGAACCATGAAATCGACGGACAGCACCAGGAGCTGTTGCGCCGTGT
GGACGATTTGTTGAAGGGCGCCAGGGCGAAAAAGGGTAGCGAAGAGATCGGAAAGCTGATGTGGTTCCTGAAAAAGTACG
TGCGCAGGCACTTCAAGGACGAGGAAAAGATTCAGCTGGAATCGGGCTATCCCGGGTACGAGGCGCACAAGGCCCAGCAC
GAGATGTTCTTTCGCGAGGTGCTCAGGTTGGAGGCGCTGCATGCCGAGCAGGGGGAGAACACGCTGATGATAGTTGCCGC
CGTCAACGCCATGTGCGAGTGGCTGCGCAGCCATTTCAAAAGGATGGACATGGAGTTGATCCAGTTCCTGCAGGACAACA
ACATCACCCGCCCTGCGCTGGACCCCGACGACCTGAGCGAGGATTCCGAGGACTACTGA

Upstream 100 bases:

>100_bases
TTGCTAAAGTTGCATGGAGTTTTGCCGATAATTAACCACAGAGGGCGATAAAACACTCTCACACTCCCACAAGGAGACAG
GCGGTACAGGAGAGAGATGC

Downstream 100 bases:

>100_bases
CCGTCCGGAAACTTAAGCGAGCTGAATGAACAAAAGGAGCAACTTCCCTAGGGCGGTTGCTCCTTTTTTGTTTTCCGGCC
GGCTTTTATCGACCTTTATC

Product: hemerythrin family protein

Products: NA

Alternate protein names: Hemerythrin; Metal Dependent Phosphohydrolase; Methyl-Accepting Chemotaxis Sensory Transducer; Adenylate/Guanylate Cyclase; Methyl-Accepting Chemotaxis Protein

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MLTQWRDEMITGNHEIDGQHQELLRRVDDLLKGARAKKGSEEIGKLMWFLKKYVRRHFKDEEKIQLESGYPGYEAHKAQH
EMFFREVLRLEALHAEQGENTLMIVAAVNAMCEWLRSHFKRMDMELIQFLQDNNITRPALDPDDLSEDSEDY

Sequences:

>Translated_152_residues
MLTQWRDEMITGNHEIDGQHQELLRRVDDLLKGARAKKGSEEIGKLMWFLKKYVRRHFKDEEKIQLESGYPGYEAHKAQH
EMFFREVLRLEALHAEQGENTLMIVAAVNAMCEWLRSHFKRMDMELIQFLQDNNITRPALDPDDLSEDSEDY
>Mature_152_residues
MLTQWRDEMITGNHEIDGQHQELLRRVDDLLKGARAKKGSEEIGKLMWFLKKYVRRHFKDEEKIQLESGYPGYEAHKAQH
EMFFREVLRLEALHAEQGENTLMIVAAVNAMCEWLRSHFKRMDMELIQFLQDNNITRPALDPDDLSEDSEDY

Specific function: Unknown

COG id: COG2703

COG function: function code P; Hemerythrin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18036; Mature: 18036

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTQWRDEMITGNHEIDGQHQELLRRVDDLLKGARAKKGSEEIGKLMWFLKKYVRRHFKD
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
EEKIQLESGYPGYEAHKAQHEMFFREVLRLEALHAEQGENTLMIVAAVNAMCEWLRSHFK
CHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RMDMELIQFLQDNNITRPALDPDDLSEDSEDY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLTQWRDEMITGNHEIDGQHQELLRRVDDLLKGARAKKGSEEIGKLMWFLKKYVRRHFKD
CCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
EEKIQLESGYPGYEAHKAQHEMFFREVLRLEALHAEQGENTLMIVAAVNAMCEWLRSHFK
CHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
RMDMELIQFLQDNNITRPALDPDDLSEDSEDY
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA