Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118641

Identifier: 197118641

GI number: 197118641

Start: 2629115

End: 2629957

Strand: Reverse

Name: 197118641

Synonym: Gbem_2260

Alternate gene names: NA

Gene position: 2629957-2629115 (Counterclockwise)

Preceding gene: 197118643

Following gene: 197118640

Centisome position: 56.99

GC content: 58.13

Gene sequence:

>843_bases
ATGCGCAAGATCAGTTATAGCTGCGAGGTGCATGCAGCGTTCGACACCATCTGGAAACTCATCATCGAAAAGGTTGAGCA
GCCGCAAACGTACCTGCCGGGCGCGGTCCAGTCGCGCATCCTGCAGCATTACGGCAACGGGCTTTTACGGGAGGTTCGCG
GGGAGGGGCTGCTGATCAAGGAGAAGGTGGTGATTGACAAGACCCACGGCGAGGTGCACTACTTCCTAATGGAGCACCCG
CTCTTTACCGGGCGCGTCATCAACCGTGTGGTTCCTTCCTCGGTGCAGAGCCCTGTGGCCCCGCAGATCCTCAGCATCGA
GGTCGACTGGACGCCGAAGGATGATGAGGCCGAGAGAATGATCCAGGCGACGATACCGGAGCAGATCCAGCGGGAGGTGC
TGAGCCTCAAACAGCTGGCAGAAGCCATGGAAAAAGAGGAATCGCTGCCGTTGCACACCCCTTATGCTTTCGGCATCACC
ATGACCCTCACTTTCAGCGACGCGCTGGAAAAGGTGCAGCAGGAGCTGCAGAAAGAGGGCTTCGGCATCATCTCTTACAT
AGACATCAAAAAGAAATTCCAGGAGAAGCTGCACAAGGATTTTCGCAACTACCAGATCCTGGGAGCCTGCAACCCCGGTC
TCGCCTACCAGGCGTTCGGCATCGAGATCAACATCGGCACCCTGCTGCCGTGCAACGTCGTGGTCTATTCCCTTTCGGAG
GGGCGTACCGTGGTGATGGTCATGGACCCGGTCGCTGCGCTCTCGTTGGTGGGGAACAGCCAGTTGACCGAACTGGCTGA
GACGGTCAAGCAGAGCATGCAGAGGGTGATCGCCGCCCTTTGA

Upstream 100 bases:

>100_bases
AGTTGGTGATGTTTTTTCCTGCTGCTTTTCGCTTGCTTTTGTCAAGCCGCTTTTCGCTTACTTTGGCTTCTTTTCCGCCA
ACGGCAGGAGGTGCCAGGTC

Downstream 100 bases:

>100_bases
CGCTGCGCAGCTATCGTAACGGGGGATGCCATGCTTAAGATAAAGCGCATATACGAGGAAGCCGACCCTAAAGACGGGCT
GCGCATCCTGGTCGACCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MRKISYSCEVHAAFDTIWKLIIEKVEQPQTYLPGAVQSRILQHYGNGLLREVRGEGLLIKEKVVIDKTHGEVHYFLMEHP
LFTGRVINRVVPSSVQSPVAPQILSIEVDWTPKDDEAERMIQATIPEQIQREVLSLKQLAEAMEKEESLPLHTPYAFGIT
MTLTFSDALEKVQQELQKEGFGIISYIDIKKKFQEKLHKDFRNYQILGACNPGLAYQAFGIEINIGTLLPCNVVVYSLSE
GRTVVMVMDPVAALSLVGNSQLTELAETVKQSMQRVIAAL

Sequences:

>Translated_280_residues
MRKISYSCEVHAAFDTIWKLIIEKVEQPQTYLPGAVQSRILQHYGNGLLREVRGEGLLIKEKVVIDKTHGEVHYFLMEHP
LFTGRVINRVVPSSVQSPVAPQILSIEVDWTPKDDEAERMIQATIPEQIQREVLSLKQLAEAMEKEESLPLHTPYAFGIT
MTLTFSDALEKVQQELQKEGFGIISYIDIKKKFQEKLHKDFRNYQILGACNPGLAYQAFGIEINIGTLLPCNVVVYSLSE
GRTVVMVMDPVAALSLVGNSQLTELAETVKQSMQRVIAAL
>Mature_280_residues
MRKISYSCEVHAAFDTIWKLIIEKVEQPQTYLPGAVQSRILQHYGNGLLREVRGEGLLIKEKVVIDKTHGEVHYFLMEHP
LFTGRVINRVVPSSVQSPVAPQILSIEVDWTPKDDEAERMIQATIPEQIQREVLSLKQLAEAMEKEESLPLHTPYAFGIT
MTLTFSDALEKVQQELQKEGFGIISYIDIKKKFQEKLHKDFRNYQILGACNPGLAYQAFGIEINIGTLLPCNVVVYSLSE
GRTVVMVMDPVAALSLVGNSQLTELAETVKQSMQRVIAAL

Specific function: Unknown

COG id: COG3439

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31523; Mature: 31523

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKISYSCEVHAAFDTIWKLIIEKVEQPQTYLPGAVQSRILQHYGNGLLREVRGEGLLIK
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEE
EKVVIDKTHGEVHYFLMEHPLFTGRVINRVVPSSVQSPVAPQILSIEVDWTPKDDEAERM
EEEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCEEEEEEEECCCCCHHHHHH
IQATIPEQIQREVLSLKQLAEAMEKEESLPLHTPYAFGITMTLTFSDALEKVQQELQKEG
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCC
FGIISYIDIKKKFQEKLHKDFRNYQILGACNPGLAYQAFGIEINIGTLLPCNVVVYSLSE
CCEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC
GRTVVMVMDPVAALSLVGNSQLTELAETVKQSMQRVIAAL
CCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKISYSCEVHAAFDTIWKLIIEKVEQPQTYLPGAVQSRILQHYGNGLLREVRGEGLLIK
CCCCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCEEEE
EKVVIDKTHGEVHYFLMEHPLFTGRVINRVVPSSVQSPVAPQILSIEVDWTPKDDEAERM
EEEEEECCCCCEEEEEECCCCHHHHHHHHHCCHHHCCCCCCEEEEEEEECCCCCHHHHHH
IQATIPEQIQREVLSLKQLAEAMEKEESLPLHTPYAFGITMTLTFSDALEKVQQELQKEG
HHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEEHHHHHHHHHHHHHHCC
FGIISYIDIKKKFQEKLHKDFRNYQILGACNPGLAYQAFGIEINIGTLLPCNVVVYSLSE
CCEEEHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEEEEECCCCCCCEEEEEEECC
GRTVVMVMDPVAALSLVGNSQLTELAETVKQSMQRVIAAL
CCEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA