Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197118589

Identifier: 197118589

GI number: 197118589

Start: 2568381

End: 2569508

Strand: Reverse

Name: 197118589

Synonym: Gbem_2208

Alternate gene names: NA

Gene position: 2569508-2568381 (Counterclockwise)

Preceding gene: 197118590

Following gene: 197118587

Centisome position: 55.68

GC content: 63.12

Gene sequence:

>1128_bases
ATGCGCCGCCTCTATTACCTCATGGCCGCCTTGGTGATCCTCCTGTCTGCTTTGGGATACTTTTATGCCAGGAAAGGGAA
GGAACCCGAGGCGGAGAAAACCTACAGCCTTAACGAGGCCTTGGGTGGGAGTGCGGCGGAAGGGTTCAATAGGGCCGAGA
GGGCTAGGCGCTTCAGTTTCCCCGCGGATCACGGGCCGCACGAGGGATTCAGAAACGAGTGGTGGTACTTCACCGGGAAC
CTGACCGGAGCCTCCGGGCGCCGCTTCGGCTACCAGCTCACCTTCTTCAGATCGGCCCTCACCCCGCATCCGGTAAAGAG
GGAGTCTGCCTGGGGGACCAACGAGGTCTTCATGGCGCACTTCGCAGTGACCGACGTGGAGGGGAAGCGGTTCCGCTTCG
GCGAGCGTTTCACCCGCGCCGCCCTTGGGCTCGCGGGTGCTGGAGGGCGCCCCCTTGCCGTGCGCCTGGAAGATTGGTCC
GTCCTGGAGACGGGGGCAAAGCCTTGGAGCGCCAAACTGACCGCGGCCGATGGCGCCATGGCCATCGACCTGGACCTCAC
GAGCCTGAAGCCGGTGATACTAAACGGGGAAGGGGGGCTCAGCCGAAAGAGCGGAGCTTCGGGAAACGCCTCCTATTACT
ACAGCATCCCCAGGCTTAGCACCTCCGGTACCATCCGGATCGGCGAGGACTCCTTCAAGGTCTCTGGCATCTCCTGGCTC
GATCGTGAATGGAGCACAAGCGCCCTGGACAAGGACCAGGCCGGCTGGGACTGGTTCGCGCTGCACCTTTCCGACGGCCG
CGACATCATGTACTACCAGTTGCGCAGGCGCGACGGCAGCCGCGATCCATTCTCCGCAGGCACCCTGGTAGGTACCGGCG
GCAGTTACCGGCATCTAAAACGCGAGGAGGTCCGACTTGAGCCGTTGCGGCGCTGGACCAGCCCGAAGAGTGGCGCCAGC
TATCCCTCCGGCTGGCGCCTGAAGATACCGTCGCAAGGGATAGACATCGAGGTAGCGCCGCTTTTGGCCGACCAGGAATT
GGCTGCAGGTTTCCGCTATTGGGAAGGGGCGGTGGAGGTGCGAGGGAGCACAGGCGGTTCGGGATATTTGGAGATGACGG
GGTATTAG

Upstream 100 bases:

>100_bases
TTGCTTCTTTCCGTGTCAGCGGCGCTTCTGGCCGGCATCTACCCGTCGCTCAGGATCGCCCGCAACTCTCCCGCGCTGGC
CCTGAAGGAGGAGGATTAGC

Downstream 100 bases:

>100_bases
TACGGTAGCTGCGCAGGGCTTGGGGAGGGGCTTGCTGGATCTTTTGGCGGGCCGGAAAAACAAAAAAGCGGTTAGCTTTC
GCTAACCGCTTTGTGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Hydrolase; Hydrolase; Lipoprotein; ABC Transporter Type C Secreted Protein; Hydroxyneurosporene Synthase; Attachment Protein; ABC Transporter Lipoprotein; Secreted Hydrolase-Like; Twin-Arginine Translocation Pathway Signal; ABC-Type Transport System Hydrolase Component; Signal Peptide; Hydroxymethylglutaryl-Co A Reductase

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN
LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS
VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL
DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS
YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY

Sequences:

>Translated_375_residues
MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN
LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS
VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL
DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS
YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY
>Mature_375_residues
MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSFPADHGPHEGFRNEWWYFTGN
LTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAHFAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWS
VLETGAKPWSAKLTAADGAMAIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL
DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLKREEVRLEPLRRWTSPKSGAS
YPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEVRGSTGGSGYLEMTGY

Specific function: Unknown

COG id: COG5621

COG function: function code R; Predicted secreted hydrolase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41581; Mature: 41581

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHCCC
PADHGPHEGFRNEWWYFTGNLTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAH
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEEEE
FAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWSVLETGAKPWSAKLTAADGAM
EEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCE
AIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL
EEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCEEE
DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLK
CCCCCCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHH
REEVRLEPLRRWTSPKSGASYPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEV
HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECEECCHHHHHHHHEECCEEEE
RGSTGGSGYLEMTGY
ECCCCCCCEEEECCC
>Mature Secondary Structure
MRRLYYLMAALVILLSALGYFYARKGKEPEAEKTYSLNEALGGSAAEGFNRAERARRFSF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEHHHHCCCCHHHHHHHHHHHHHCCC
PADHGPHEGFRNEWWYFTGNLTGASGRRFGYQLTFFRSALTPHPVKRESAWGTNEVFMAH
CCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCEEEEE
FAVTDVEGKRFRFGERFTRAALGLAGAGGRPLAVRLEDWSVLETGAKPWSAKLTAADGAM
EEEEECCCCCEEHHHHHHHHHHHCCCCCCCEEEEEECCCEEEECCCCCCCEEEEECCCCE
AIDLDLTSLKPVILNGEGGLSRKSGASGNASYYYSIPRLSTSGTIRIGEDSFKVSGISWL
EEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCEEECCCEEE
DREWSTSALDKDQAGWDWFALHLSDGRDIMYYQLRRRDGSRDPFSAGTLVGTGGSYRHLK
CCCCCCHHCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEECCCCCHHHH
REEVRLEPLRRWTSPKSGASYPSGWRLKIPSQGIDIEVAPLLADQELAAGFRYWEGAVEV
HHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECEECCHHHHHHHHEECCEEEE
RGSTGGSGYLEMTGY
ECCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA