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The map label for this gene is livM [H]

Identifier: 197118568

GI number: 197118568

Start: 2546710

End: 2547672

Strand: Reverse

Name: livM [H]

Synonym: Gbem_2187

Alternate gene names: 197118568

Gene position: 2547672-2546710 (Counterclockwise)

Preceding gene: 197118569

Following gene: 197118567

Centisome position: 55.2

GC content: 61.79

Gene sequence:

>963_bases
TTGAAATCGGACAAACTCAAATTCTTCGTTTTCTGCCTGGTGGTGCTCCTCGCCCCCTTGCCTCTCTCCGGAAGCTACCT
AACCAACGTCCTCGTCTTCGTCGGGGTCAACAGCATCCTCGCGCTGGGTCTCAACCTGCTGCTGGGCTTCGCCGGGCAGA
TCTCGCTCGGCCAGGCGGCCTTCTTCGGCCTGGGCGCCTACGGCTCGGGCGTGCTGACCTCAGCCTATGCCTTCAACCCC
TGGGTCGCCATGGTCGTGGTCGCGCTTGCGGTCGCAGCCTTCGCCTTCGCCATCGGTTTCCCGGTGCTGCGCCTCAAGGG
TCACTACCTGGCCATGGCCACCCTCGGCGTCGGCGTCATCGCCAACATCGCCTTCAACGAGACGGTCGACCTGACCGGCG
GCCCCTCCGGCCTATCCGGCATCCCGAATCTCGCCATCGGCTCGTTCACCTTCGACACCGACCTGAAGAACTACTACCTG
GTCTGGGGCTTCGCGCTGGTGATGATCCTGCTTGCGCTGAACCTGGTTAACTCTCGCTTCGGCCGCGGGCTGCGCGCCAT
CCACGATTCCGAGGTCGCCGCACGGGTGATGGGGGTCAACGCCAGGCTGATGAAGGTGCAGGTTTTCACCCTTTCCGCCT
TTATCTCGGCCATCGCCGGGAGCCTCTACTGCCACGTCATGACCTTCATCTCGCCCACCTCGTTCGGCTTCAACACCTCG
GTGGAGCTTTTGACCATGATCGTCATCGGAGGCCTTGGGAGCGTTTACGGCTCTATCCTTGGCGCGCTGCTATTGACCAT
GCTGCCGGAGATACTGCGGACCTTCCAGGACTACGACATCATCGTCTACGGCTCGTTGCTTATCGTCATGACCATCTACA
TGCCGGGCGGGCTGGTTAAAGGCGTGCCCGCTCTCTTCAGGCGCCTCATCCCGAAGAAGGCTAAGGAGGGGGCCAATGCT
TAA

Upstream 100 bases:

>100_bases
TCCTTTTCATCCGTCCTCAGGGGCTCTTCAAAAAGGGTGAAACCGAGAGGGTGTAACAGTTGTTTTTTGGTATCGATCTT
CTGCTGGATAAGGTTCAATT

Downstream 100 bases:

>100_bases
CCTGAACGGCATAGGGAAGAGGTTCGGCGGGCTCACCGCGCTGGACGGGATCTCCTTCAACGTCGGCAAGGGGTCCATCA
CCGGGATCATCGGACCTAAC

Product: branched-chain amino acid ABC transporter membrane protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: LIV-I protein M [H]

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MKSDKLKFFVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYGSGVLTSAYAFNP
WVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNETVDLTGGPSGLSGIPNLAIGSFTFDTDLKNYYL
VWGFALVMILLALNLVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTSFGFNTS
VELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDYDIIVYGSLLIVMTIYMPGGLVKGVPALFRRLIPKKAKEGANA

Sequences:

>Translated_320_residues
MKSDKLKFFVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYGSGVLTSAYAFNP
WVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNETVDLTGGPSGLSGIPNLAIGSFTFDTDLKNYYL
VWGFALVMILLALNLVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTSFGFNTS
VELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDYDIIVYGSLLIVMTIYMPGGLVKGVPALFRRLIPKKAKEGANA
>Mature_320_residues
MKSDKLKFFVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAAFFGLGAYGSGVLTSAYAFNP
WVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVIANIAFNETVDLTGGPSGLSGIPNLAIGSFTFDTDLKNYYL
VWGFALVMILLALNLVNSRFGRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTSFGFNTS
VELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDYDIIVYGSLLIVMTIYMPGGLVKGVPALFRRLIPKKAKEGANA

Specific function: Part of the binding-protein-dependent transport system for branched-chain amino acids. Probably responsible for the translocation of the substrates across the membrane [H]

COG id: COG4177

COG function: function code E; ABC-type branched-chain amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789865, Length=284, Percent_Identity=34.8591549295775, Blast_Score=161, Evalue=6e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR021807 [H]

Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]

EC number: NA

Molecular weight: Translated: 33899; Mature: 33899

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDKLKFFVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FFGLGAYGSGVLTSAYAFNPWVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVI
HHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHH
ANIAFNETVDLTGGPSGLSGIPNLAIGSFTFDTDLKNYYLVWGFALVMILLALNLVNSRF
HHHHCCCEEECCCCCCCCCCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTSFGFNTS
CCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
VELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDYDIIVYGSLLIVMTIYMPGGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHH
GVPALFRRLIPKKAKEGANA
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKSDKLKFFVFCLVVLLAPLPLSGSYLTNVLVFVGVNSILALGLNLLLGFAGQISLGQAA
CCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
FFGLGAYGSGVLTSAYAFNPWVAMVVVALAVAAFAFAIGFPVLRLKGHYLAMATLGVGVI
HHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHH
ANIAFNETVDLTGGPSGLSGIPNLAIGSFTFDTDLKNYYLVWGFALVMILLALNLVNSRF
HHHHCCCEEECCCCCCCCCCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GRGLRAIHDSEVAARVMGVNARLMKVQVFTLSAFISAIAGSLYCHVMTFISPTSFGFNTS
CCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
VELLTMIVIGGLGSVYGSILGALLLTMLPEILRTFQDYDIIVYGSLLIVMTIYMPGGLVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCHHH
GVPALFRRLIPKKAKEGANA
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2195019; 8041620; 9278503 [H]