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The map label for this gene is csoR [H]

Identifier: 197118552

GI number: 197118552

Start: 2530089

End: 2530379

Strand: Reverse

Name: csoR [H]

Synonym: Gbem_2171

Alternate gene names: 197118552

Gene position: 2530379-2530089 (Counterclockwise)

Preceding gene: 197118554

Following gene: 197118551

Centisome position: 54.83

GC content: 59.45

Gene sequence:

>291_bases
ATGAGCCAGTCGCCCAAAAACAAAATGACCACGCGCGTAAAGCGGATCGCCGGACAGGTGGCGGGGATCGAGCGGATGCT
GGAGGAAAAGCGTTATTGCGTCGACATCCTCAACCAAATCTCGGCAGTCCGCTCCGCCTTGGATGCGCTCGGCGTCGAAC
TCCTGACCCGCCACCTGGAGAACTGCGTACTCGGCCAAGGGACCGACAGCCAACACGAATCTGCCAAACCGATGTCGCAG
CAGGCGCTGCTTGACGAGGTAAAGACCGCGCTGTCGCGCTTTTTGAGGTAA

Upstream 100 bases:

>100_bases
CCCCCCAAATTTTCCTCTTGACCACACATACCCCATGGGGGTATCTTCGGCTTATCGAAAGAATACCCCCATGGGGTATC
ACAAAGCATAAGGAGGCGCC

Downstream 100 bases:

>100_bases
CAAGGGAGGACCAAGAGATGTCGGAAAATAACGTATTACAAGACCCCGTCTGCGGCATGGACGTGCGCGAGGACGCGCCC
CACAGCGCGACCAATGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSQSPKNKMTTRVKRIAGQVAGIERMLEEKRYCVDILNQISAVRSALDALGVELLTRHLENCVLGQGTDSQHESAKPMSQ
QALLDEVKTALSRFLR

Sequences:

>Translated_96_residues
MSQSPKNKMTTRVKRIAGQVAGIERMLEEKRYCVDILNQISAVRSALDALGVELLTRHLENCVLGQGTDSQHESAKPMSQ
QALLDEVKTALSRFLR
>Mature_95_residues
SQSPKNKMTTRVKRIAGQVAGIERMLEEKRYCVDILNQISAVRSALDALGVELLTRHLENCVLGQGTDSQHESAKPMSQQ
ALLDEVKTALSRFLR

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 10711; Mature: 10579

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQSPKNKMTTRVKRIAGQVAGIERMLEEKRYCVDILNQISAVRSALDALGVELLTRHLE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCVLGQGTDSQHESAKPMSQQALLDEVKTALSRFLR
HHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SQSPKNKMTTRVKRIAGQVAGIERMLEEKRYCVDILNQISAVRSALDALGVELLTRHLE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NCVLGQGTDSQHESAKPMSQQALLDEVKTALSRFLR
HHHCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]