| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is cusB [H]
Identifier: 197118546
GI number: 197118546
Start: 2522132
End: 2523502
Strand: Reverse
Name: cusB [H]
Synonym: Gbem_2165
Alternate gene names: 197118546
Gene position: 2523502-2522132 (Counterclockwise)
Preceding gene: 197118547
Following gene: 197118545
Centisome position: 54.68
GC content: 62.29
Gene sequence:
>1371_bases ATGAAACAAAGTGTCAAGGTTGCAATCCCGATTGTCGTTATCCTGGTGGCCGCCGTTGCCGGCGGCGGCTATTACCTGGC ACAGAAGAAAAATCCCCCCGCAGCTAAAGACAAGGCGGCGCAGGGGCCGGTGCTCTACACCTGCGCGATGCACCCCTTCA TCATCAAGGACAAGCCGGGAACCTGCCCCATCTGCGGCATGCAGTTGATCAAGAAGGTCGAGGGAGCCCAGGCGAGCGCC CAGGAGCAGAAGATGCTGGGGCACGTCTCACTCTCTCCCACCCAGGCGGTCATGGCCAACGTGGCGACCGTTCCGGCCGA TTTTGCACCTCTCTCCAAAGAGATTAACGCGGTCGGCATCGTGCAGTACGACCAGTCCAGACAGGCGAAGGTCACGGCCT GGGTGGCGGGGCGCATCGACAAGCTCCTCGTCAACACAGTCGGCGCCTACGTTTCCAAGGGGCGACCGGTAGCAGAGATC TACTCTCCCGATCTGGTAGCCGCGCAGCAGGAGTATCTCCTAGCCCTGAAGAGCCGCGAGCAGTTCCAGAAATCCTCCAT ACAGGCGATCTCCCAAGGGGGAGACGGGCTCGTTTCTTCCGCCCGCCAGAGGCTGAAGCTCATGGGGGTGAGGGACGAGC AGATTGCAGGGCTGGAGAAGGCCGGACATCCCAACATAAAGCTCCCCATTTACACCCCCCTCTCCGGTGTGGTGATCGAA AAGATGGTCCAGGAAGGGCAGTACGTGAACATGGGGGAGCCCCTTTTCAGCATCGCCGACCTCTCCAGCGTCTGGGTCGA GGTCGAGGTGTACGAGAATGAGTTCGCCTTCGTGAAGGTGGGACAGAGGGTCGAGATACTTTCCCAGTCGTATCCTGGCA AGACCTTCTCCGGGCGGGTCAGCTTCATCTATCCCTTCCTCGATCCCAAGACCCGTACCGTCAAGGTCAGGGTGGACCTG GCGAACCCCGGCTTGAAGCTCAAGACCGACATGTTCGTCAACGCCCAGATCAAGGCGCCGCTTGGCAACACGCTGGTGGT GCCGGCGACGGCGCTGATGGACACCGGCAAGCGCCAGGTCGTCTGGGTGGAGTCGCAGCCCGGCATGTTCGAGCCGCGCG ACGTGCAGGTTGGCGCGCGGGTGGGGGACAAGGTACAGATCCTCTCCGGCTTGAAGCGGGGGGACAAGGTCGCGGCTTCC GGCGGTTATCTGATCGATTCCGAGTCGCAGCTCTCGGCAGGGAGCGGTGGCGGCGGCCACGAAGGGCACGCAGGAGGAGC GAAAGCTCCCGGCGGCACAGCCCCCGGAGCCGTTGCTCCGGCCGCCCCCAAGAAGGGCGGCGGCATGAACATGGATGACA TGAAAATGTAG
Upstream 100 bases:
>100_bases AGTACTACGACTCGATGGCCGACTACCAGATGAAGCTGGCGCAGCTAGAGGCGCTGATCGGCAAAGAACTCTAAAAAAAT CCCGACCACGAGGTATTGAT
Downstream 100 bases:
>100_bases CAAGAGGTATTTTTCGCACTGAACATCAAGCAGCCTCCAGCTCTCCCCATCCCTTGATGGGAGCGGGCTGGGGGGGTGGG TGAACCTGCCAGCACCGCAA
Product: RND family metal ion efflux pump membrane fusion protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MKQSVKVAIPIVVILVAAVAGGGYYLAQKKNPPAAKDKAAQGPVLYTCAMHPFIIKDKPGTCPICGMQLIKKVEGAQASA QEQKMLGHVSLSPTQAVMANVATVPADFAPLSKEINAVGIVQYDQSRQAKVTAWVAGRIDKLLVNTVGAYVSKGRPVAEI YSPDLVAAQQEYLLALKSREQFQKSSIQAISQGGDGLVSSARQRLKLMGVRDEQIAGLEKAGHPNIKLPIYTPLSGVVIE KMVQEGQYVNMGEPLFSIADLSSVWVEVEVYENEFAFVKVGQRVEILSQSYPGKTFSGRVSFIYPFLDPKTRTVKVRVDL ANPGLKLKTDMFVNAQIKAPLGNTLVVPATALMDTGKRQVVWVESQPGMFEPRDVQVGARVGDKVQILSGLKRGDKVAAS GGYLIDSESQLSAGSGGGGHEGHAGGAKAPGGTAPGAVAPAAPKKGGGMNMDDMKM
Sequences:
>Translated_456_residues MKQSVKVAIPIVVILVAAVAGGGYYLAQKKNPPAAKDKAAQGPVLYTCAMHPFIIKDKPGTCPICGMQLIKKVEGAQASA QEQKMLGHVSLSPTQAVMANVATVPADFAPLSKEINAVGIVQYDQSRQAKVTAWVAGRIDKLLVNTVGAYVSKGRPVAEI YSPDLVAAQQEYLLALKSREQFQKSSIQAISQGGDGLVSSARQRLKLMGVRDEQIAGLEKAGHPNIKLPIYTPLSGVVIE KMVQEGQYVNMGEPLFSIADLSSVWVEVEVYENEFAFVKVGQRVEILSQSYPGKTFSGRVSFIYPFLDPKTRTVKVRVDL ANPGLKLKTDMFVNAQIKAPLGNTLVVPATALMDTGKRQVVWVESQPGMFEPRDVQVGARVGDKVQILSGLKRGDKVAAS GGYLIDSESQLSAGSGGGGHEGHAGGAKAPGGTAPGAVAPAAPKKGGGMNMDDMKM >Mature_456_residues MKQSVKVAIPIVVILVAAVAGGGYYLAQKKNPPAAKDKAAQGPVLYTCAMHPFIIKDKPGTCPICGMQLIKKVEGAQASA QEQKMLGHVSLSPTQAVMANVATVPADFAPLSKEINAVGIVQYDQSRQAKVTAWVAGRIDKLLVNTVGAYVSKGRPVAEI YSPDLVAAQQEYLLALKSREQFQKSSIQAISQGGDGLVSSARQRLKLMGVRDEQIAGLEKAGHPNIKLPIYTPLSGVVIE KMVQEGQYVNMGEPLFSIADLSSVWVEVEVYENEFAFVKVGQRVEILSQSYPGKTFSGRVSFIYPFLDPKTRTVKVRVDL ANPGLKLKTDMFVNAQIKAPLGNTLVVPATALMDTGKRQVVWVESQPGMFEPRDVQVGARVGDKVQILSGLKRGDKVAAS GGYLIDSESQLSAGSGGGGHEGHAGGAKAPGGTAPGAVAPAAPKKGGGMNMDDMKM
Specific function: Part of a cation efflux system that mediates resistance to copper and silver [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
Organism=Escherichia coli, GI1786787, Length=408, Percent_Identity=29.9019607843137, Blast_Score=149, Evalue=5e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006143 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48325; Mature: 48325
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSVKVAIPIVVILVAAVAGGGYYLAQKKNPPAAKDKAAQGPVLYTCAMHPFIIKDKPG CCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCC TCPICGMQLIKKVEGAQASAQEQKMLGHVSLSPTQAVMANVATVPADFAPLSKEINAVGI CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEE VQYDQSRQAKVTAWVAGRIDKLLVNTVGAYVSKGRPVAEIYSPDLVAAQQEYLLALKSRE EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHH QFQKSSIQAISQGGDGLVSSARQRLKLMGVRDEQIAGLEKAGHPNIKLPIYTPLSGVVIE HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCHHHCCCCCEEEEEECCCHHHHHH KMVQEGQYVNMGEPLFSIADLSSVWVEVEVYENEFAFVKVGQRVEILSQSYPGKTFSGRV HHHHCCCEECCCCCHHHHHCCCEEEEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCEE SFIYPFLDPKTRTVKVRVDLANPGLKLKTDMFVNAQIKAPLGNTLVVPATALMDTGKRQV EEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHCCCCEEE VWVESQPGMFEPRDVQVGARVGDKVQILSGLKRGDKVAASGGYLIDSESQLSAGSGGGGH EEEECCCCCCCCCCEEECCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCCCC EGHAGGAKAPGGTAPGAVAPAAPKKGGGMNMDDMKM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC >Mature Secondary Structure MKQSVKVAIPIVVILVAAVAGGGYYLAQKKNPPAAKDKAAQGPVLYTCAMHPFIIKDKPG CCCCEEEHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCEEEECCCC TCPICGMQLIKKVEGAQASAQEQKMLGHVSLSPTQAVMANVATVPADFAPLSKEINAVGI CCCHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCEEEE VQYDQSRQAKVTAWVAGRIDKLLVNTVGAYVSKGRPVAEIYSPDLVAAQQEYLLALKSRE EEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHH QFQKSSIQAISQGGDGLVSSARQRLKLMGVRDEQIAGLEKAGHPNIKLPIYTPLSGVVIE HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHCHHHCCCCCEEEEEECCCHHHHHH KMVQEGQYVNMGEPLFSIADLSSVWVEVEVYENEFAFVKVGQRVEILSQSYPGKTFSGRV HHHHCCCEECCCCCHHHHHCCCEEEEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCEE SFIYPFLDPKTRTVKVRVDLANPGLKLKTDMFVNAQIKAPLGNTLVVPATALMDTGKRQV EEEEECCCCCCEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEECHHHHCCCCEEE VWVESQPGMFEPRDVQVGARVGDKVQILSGLKRGDKVAASGGYLIDSESQLSAGSGGGGH EEEECCCCCCCCCCEEECCCCCCHHHHHHHCCCCCEEECCCCEEECCCCCCCCCCCCCCC EGHAGGAKAPGGTAPGAVAPAAPKKGGGMNMDDMKM CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]