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The map label for this gene is dcd [H]

Identifier: 197118537

GI number: 197118537

Start: 2510541

End: 2511059

Strand: Reverse

Name: dcd [H]

Synonym: Gbem_2156

Alternate gene names: 197118537

Gene position: 2511059-2510541 (Counterclockwise)

Preceding gene: 197118538

Following gene: 197118534

Centisome position: 54.41

GC content: 52.99

Gene sequence:

>519_bases
ATGTCCATACTGGTAGGGCAGGAAATGCTGGATGCAATCAAACGGGGCGAGATAGTCATAGATCCGCTGGATGAGTCTCA
AATCGGTCCAGGATCGGTCGATTTGACATTGGGAAACGACTTCAGGGTTTTCAAAAAAGAGATCGGGATCTGCCACGTAC
ACAACGAGTCCGACTTTGCCGACGTTACTGACCTTATCTCGCTGGAAGAAGGGGAATACATCACCATAGCCCCCTGCGAA
ATGATTCTCGGCATCACCAGGGAGAGGATCACGCTTGCAGAAACAATGGCCGGATGGTTGGAAGGGCGTAGCCGCTTCGC
CCGCTTCGGCCTGGCTGTACACGTTACAGCGGGGTTCATGCAGCCTGGCATCTCGAATCACCAGGTGTTGGAAATCGTGA
ATTTGGGCCACAGGCCGTTGGCGCTTTATCCGGGTACCAAAATCTGCCAGTTTGTTTTCGAGCGTTGTATCGGATCGGCG
CGATATCAGGGGCGCTTTATCGACCAGGGAAAACCTTGA

Upstream 100 bases:

>100_bases
CATTGACTGTGAAACAACCTTTGCAGACTAAAATCGTGCTATGATTGAAAAGCCCACAACGTACTGCAAGGGTCATTTCT
GAATAACGGGGGGGCTGAGC

Downstream 100 bases:

>100_bases
ACATGAGGTGCCTTAGCTAAGCCTGCAGCGCCTCTCTGACCTTCGCCGCCAGCGCCTGCGTGGTAAAGGGCTTTTGCACG
AAGCAGACCTCTCGTCCGAT

Product: deoxycytidine triphosphate deaminase/deoxyuridine triphosphate pyrophosphohydrolase

Products: NA

Alternate protein names: dCTP deaminase [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MSILVGQEMLDAIKRGEIVIDPLDESQIGPGSVDLTLGNDFRVFKKEIGICHVHNESDFADVTDLISLEEGEYITIAPCE
MILGITRERITLAETMAGWLEGRSRFARFGLAVHVTAGFMQPGISNHQVLEIVNLGHRPLALYPGTKICQFVFERCIGSA
RYQGRFIDQGKP

Sequences:

>Translated_172_residues
MSILVGQEMLDAIKRGEIVIDPLDESQIGPGSVDLTLGNDFRVFKKEIGICHVHNESDFADVTDLISLEEGEYITIAPCE
MILGITRERITLAETMAGWLEGRSRFARFGLAVHVTAGFMQPGISNHQVLEIVNLGHRPLALYPGTKICQFVFERCIGSA
RYQGRFIDQGKP
>Mature_171_residues
SILVGQEMLDAIKRGEIVIDPLDESQIGPGSVDLTLGNDFRVFKKEIGICHVHNESDFADVTDLISLEEGEYITIAPCEM
ILGITRERITLAETMAGWLEGRSRFARFGLAVHVTAGFMQPGISNHQVLEIVNLGHRPLALYPGTKICQFVFERCIGSAR
YQGRFIDQGKP

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family [H]

Homologues:

Organism=Escherichia coli, GI1788379, Length=156, Percent_Identity=39.7435897435897, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011962
- InterPro:   IPR010550
- InterPro:   IPR008180 [H]

Pfam domain/function: PF06559 DCD; PF00692 dUTPase [H]

EC number: =3.5.4.13 [H]

Molecular weight: Translated: 19076; Mature: 18945

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILVGQEMLDAIKRGEIVIDPLDESQIGPGSVDLTLGNDFRVFKKEIGICHVHNESDFA
CCEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECCCCHH
DVTDLISLEEGEYITIAPCEMILGITRERITLAETMAGWLEGRSRFARFGLAVHVTAGFM
HHHHHHCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEHHH
QPGISNHQVLEIVNLGHRPLALYPGTKICQFVFERCIGSARYQGRFIDQGKP
CCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEECCCCCC
>Mature Secondary Structure 
SILVGQEMLDAIKRGEIVIDPLDESQIGPGSVDLTLGNDFRVFKKEIGICHVHNESDFA
CEEECHHHHHHHHCCCEEEECCCCCCCCCCEEEEEECCCHHHHHHHCCEEEEECCCCHH
DVTDLISLEEGEYITIAPCEMILGITRERITLAETMAGWLEGRSRFARFGLAVHVTAGFM
HHHHHHCCCCCCEEEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEHHH
QPGISNHQVLEIVNLGHRPLALYPGTKICQFVFERCIGSARYQGRFIDQGKP
CCCCCCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA