Click here to switch to the map view.

The map label for this gene is 197118526

Identifier: 197118526

GI number: 197118526

Start: 2496315

End: 2496989

Strand: Reverse

Name: 197118526

Synonym: Gbem_2144

Alternate gene names: NA

Gene position: 2496989-2496315 (Counterclockwise)

Preceding gene: 197118528

Following gene: 308535288

Centisome position: 54.1

GC content: 53.93

Gene sequence:

>675_bases
GTGGGAAGCCTGACTGCTTTAGAAGAAAGAATCACCGAGAAGCTGGCACAGCACAAAAAACAGCTCGCGGTGAAGCAACA
GCAGCTTGACCAGACCATGAAGGAGTTGTTGGAACAGAGGGAGCGATTGTCTGCCGTGGCGGAGTCCCGGGTCGAGGCCA
TCATCATGCCGCGCCTGGAACGTCTGGCTCGCCAGTTCCAGAATGCCGAGATCGAGGTCGTGCACACCGATGAAGGTTTT
ATCTCCACCTGCAGGTTTGCGCACACCCCTCAGTTTCCTGCAACGGTGAGGCTCAGTATCGAGCTGTTGCCGGCCTCTTC
CGATCAGTTGACCGCGCGATATGACCTCAGCATTCTTCCTGCCTTGATGGAATATTCCCAAAATGCCGAGAAGAACATTC
AGTTGGGAGACGAGGAGTCCCTCGCCGCATGGGTGGAAGACAGGGTCCTTGCCTTTCTCGACGATTACCTCAGGCTGGAA
ACTCACCCGCTTTACCAGAAGGACAACCTGGTTGTCGACGTCGTTTGCGGCATGCATATTTCATTCGTTTCAGCAGCGAC
GACCCTGGAGCGTAACGGCTACACCTATTATTTTTGTTCCGAGCACTGCAGGGACCTTTTTCTGGAGAAATTTGAAGACC
TAATCCCCCACCAAGAGGCAGAGAAGAAGGTGTGA

Upstream 100 bases:

>100_bases
GTGACGGTAATATTTATGGTATAGTTCGGCTAAAGGTTGAAAAGCAAGCGGTGAGTCCAGTTCAAAATGAGAGAGCCTTT
TCTTGTGGTGGAGGTGCCCA

Downstream 100 bases:

>100_bases
TTGTTAACGGCCGAAGACATCTCGAATGGTGTCCCGGTGCTCTTTCTCCCCGTTTTTCCTTCTCGTAAAGCTTCCATATC
AATTCGCTTAAAAGATGACC

Product: YHS/TRASH domain-containing protein

Products: NA

Alternate protein names: YHS/TRASH Domain-Containing Protein; YHS Domain-Containing Protein

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MGSLTALEERITEKLAQHKKQLAVKQQQLDQTMKELLEQRERLSAVAESRVEAIIMPRLERLARQFQNAEIEVVHTDEGF
ISTCRFAHTPQFPATVRLSIELLPASSDQLTARYDLSILPALMEYSQNAEKNIQLGDEESLAAWVEDRVLAFLDDYLRLE
THPLYQKDNLVVDVVCGMHISFVSAATTLERNGYTYYFCSEHCRDLFLEKFEDLIPHQEAEKKV

Sequences:

>Translated_224_residues
MGSLTALEERITEKLAQHKKQLAVKQQQLDQTMKELLEQRERLSAVAESRVEAIIMPRLERLARQFQNAEIEVVHTDEGF
ISTCRFAHTPQFPATVRLSIELLPASSDQLTARYDLSILPALMEYSQNAEKNIQLGDEESLAAWVEDRVLAFLDDYLRLE
THPLYQKDNLVVDVVCGMHISFVSAATTLERNGYTYYFCSEHCRDLFLEKFEDLIPHQEAEKKV
>Mature_223_residues
GSLTALEERITEKLAQHKKQLAVKQQQLDQTMKELLEQRERLSAVAESRVEAIIMPRLERLARQFQNAEIEVVHTDEGFI
STCRFAHTPQFPATVRLSIELLPASSDQLTARYDLSILPALMEYSQNAEKNIQLGDEESLAAWVEDRVLAFLDDYLRLET
HPLYQKDNLVVDVVCGMHISFVSAATTLERNGYTYYFCSEHCRDLFLEKFEDLIPHQEAEKKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25803; Mature: 25671

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLTALEERITEKLAQHKKQLAVKQQQLDQTMKELLEQRERLSAVAESRVEAIIMPRLE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLARQFQNAEIEVVHTDEGFISTCRFAHTPQFPATVRLSIELLPASSDQLTARYDLSILP
HHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHHHH
ALMEYSQNAEKNIQLGDEESLAAWVEDRVLAFLDDYLRLETHPLYQKDNLVVDVVCGMHI
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH
SFVSAATTLERNGYTYYFCSEHCRDLFLEKFEDLIPHQEAEKKV
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure 
GSLTALEERITEKLAQHKKQLAVKQQQLDQTMKELLEQRERLSAVAESRVEAIIMPRLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLARQFQNAEIEVVHTDEGFISTCRFAHTPQFPATVRLSIELLPASSDQLTARYDLSILP
HHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEEEEHHHHHHH
ALMEYSQNAEKNIQLGDEESLAAWVEDRVLAFLDDYLRLETHPLYQKDNLVVDVVCGMHI
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHH
SFVSAATTLERNGYTYYFCSEHCRDLFLEKFEDLIPHQEAEKKV
HHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA