Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197118393

Identifier: 197118393

GI number: 197118393

Start: 2315403

End: 2315717

Strand: Direct

Name: 197118393

Synonym: Gbem_2011

Alternate gene names: NA

Gene position: 2315403-2315717 (Clockwise)

Preceding gene: 197118392

Following gene: 308535279

Centisome position: 50.17

GC content: 39.05

Gene sequence:

>315_bases
GTGAAAAAAAACCTTTTGTCAGTAGCCACAGCGTTTATGACGATATTTTTAGCCCAGACAGCGAATTGTGCAGTAAAGAA
AAAAAACTACACTGTAGAACCAAATGCTCAAATATATGGGAACGTGGCAGGTCGTATGGACATTGTCGATACGTTAGTCA
AATTCGTTAAGGCGCATGGAAACAGGTGTGATAGCGTGAGCGCCGCATCAGATAACATGTTATCAAAGGGATATACACTC
AAATGCAACAAATATAATTACACATATCAAATACTGGATAAGGGCGGAAAATGGTATTTGCAGGTGGATCAATAA

Upstream 100 bases:

>100_bases
TCCTACAGCCCGTCCTGCACCTGTCACCACGATGACCAGCCAACGCAGCTATAAATCAGCGTTGCCCAGTTTCAAAAATG
AATAATAAAGGAGGTGTGAA

Downstream 100 bases:

>100_bases
GGATGTAGGGGCAGGTAGGGTCAGGTAGGGTCAGGTAGGGTCAGGTCTGGACATTAACAGGACCCCTCCTATGGAGGTGA
TAACCCCTGACTTGTCCAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MKKNLLSVATAFMTIFLAQTANCAVKKKNYTVEPNAQIYGNVAGRMDIVDTLVKFVKAHGNRCDSVSAASDNMLSKGYTL
KCNKYNYTYQILDKGGKWYLQVDQ

Sequences:

>Translated_104_residues
MKKNLLSVATAFMTIFLAQTANCAVKKKNYTVEPNAQIYGNVAGRMDIVDTLVKFVKAHGNRCDSVSAASDNMLSKGYTL
KCNKYNYTYQILDKGGKWYLQVDQ
>Mature_104_residues
MKKNLLSVATAFMTIFLAQTANCAVKKKNYTVEPNAQIYGNVAGRMDIVDTLVKFVKAHGNRCDSVSAASDNMLSKGYTL
KCNKYNYTYQILDKGGKWYLQVDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11641; Mature: 11641

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLLSVATAFMTIFLAQTANCAVKKKNYTVEPNAQIYGNVAGRMDIVDTLVKFVKAHG
CCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCEEEECCCCCHHHHHHHHHHHHHCC
NRCDSVSAASDNMLSKGYTLKCNKYNYTYQILDKGGKWYLQVDQ
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECC
>Mature Secondary Structure
MKKNLLSVATAFMTIFLAQTANCAVKKKNYTVEPNAQIYGNVAGRMDIVDTLVKFVKAHG
CCCHHHHHHHHHHHHHHHHCCCCEEECCCEEECCCCEEEECCCCCHHHHHHHHHHHHHCC
NRCDSVSAASDNMLSKGYTLKCNKYNYTYQILDKGGKWYLQVDQ
CCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA