| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is modB-1 [H]
Identifier: 197118356
GI number: 197118356
Start: 2278336
End: 2279019
Strand: Direct
Name: modB-1 [H]
Synonym: Gbem_1974
Alternate gene names: 197118356
Gene position: 2278336-2279019 (Clockwise)
Preceding gene: 197118355
Following gene: 197118357
Centisome position: 49.37
GC content: 64.33
Gene sequence:
>684_bases ATGCCACTTCTGACCAGCGCCGATCATGATGCCATAGCCCTCTCCATCAGGGTTGCCCTGGCGGCCACGCTGCTGAGCAT CCCCTTTGGCTTCGCCTACGCCTATCTCATGACCTTTTGCCGGTTCCGCGGCAAGGTGCTGCTCGAAGTCTTGGTCAACC TCCCTCTGACGCTTCCTCCCGTTGTGATGGGGTACCTGCTGCTGCTCGCACTCGGGAAAAACGGGTGGCTCTCCTTTTTG CTCGAACCGCTTGGTGTGCGGTTGATCTTCACCTGGAAAGCGGCTGTGCTGGCCTCGGCCGTGGTGGGATTTCCCCTACT GGTACGCTCGATCAGGATCGCCATGGAAGGGATCGACAGCCGGCTCCTCCAGGCCTCCCGTACCCTGGGGGCGACCAGGC TGGACTCGCTCTTCTCGGTGGTGCTGCCGCTTTCCAAGGCGGGGGTGGTGGCCGGTTCCTCGCTGATGTTCGCTCGCAGC CTGGGCGAGTTCGGCGCCACCGTGATCGTGGCCGGCAACATCCCCGGCGCCACCCAGACCATCCCGCTGGCCATCTACGA CTACGCCGGCTCCCCGGGTGCAGAGGGCGCCGCACTCTCGCTCTGCGTGGTGGCCATTGCCATATCCGTTCTGGTGCTGC TGTTCCACGAGGCGTTGGCCCGGAAGCTGGCTGGGAGGGACTGA
Upstream 100 bases:
>100_bases CAGGCGCAGTTGCAGCCTCCGGCCGCCTCTGGAATGGAACCTGCTTAGGAAGAAGTCGCACTCACGACCGCTGCCCTTCC GGCGGCGGCAAGGAGGATGA
Downstream 100 bases:
>100_bases GATGGAACTGCGCATAAAAGCCGGCAAGGGGTTCGGAGGGGCTTTCAACCTGGAGACGGACCTAGTGGTATCCGGGGACA GGGTGGGTGTGTTCGGCGCG
Product: molybdate ABC transporter membrane protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MPLLTSADHDAIALSIRVALAATLLSIPFGFAYAYLMTFCRFRGKVLLEVLVNLPLTLPPVVMGYLLLLALGKNGWLSFL LEPLGVRLIFTWKAAVLASAVVGFPLLVRSIRIAMEGIDSRLLQASRTLGATRLDSLFSVVLPLSKAGVVAGSSLMFARS LGEFGATVIVAGNIPGATQTIPLAIYDYAGSPGAEGAALSLCVVAIAISVLVLLFHEALARKLAGRD
Sequences:
>Translated_227_residues MPLLTSADHDAIALSIRVALAATLLSIPFGFAYAYLMTFCRFRGKVLLEVLVNLPLTLPPVVMGYLLLLALGKNGWLSFL LEPLGVRLIFTWKAAVLASAVVGFPLLVRSIRIAMEGIDSRLLQASRTLGATRLDSLFSVVLPLSKAGVVAGSSLMFARS LGEFGATVIVAGNIPGATQTIPLAIYDYAGSPGAEGAALSLCVVAIAISVLVLLFHEALARKLAGRD >Mature_226_residues PLLTSADHDAIALSIRVALAATLLSIPFGFAYAYLMTFCRFRGKVLLEVLVNLPLTLPPVVMGYLLLLALGKNGWLSFLL EPLGVRLIFTWKAAVLASAVVGFPLLVRSIRIAMEGIDSRLLQASRTLGATRLDSLFSVVLPLSKAGVVAGSSLMFARSL GEFGATVIVAGNIPGATQTIPLAIYDYAGSPGAEGAALSLCVVAIAISVLVLLFHEALARKLAGRD
Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=228, Percent_Identity=48.2456140350877, Blast_Score=192, Evalue=1e-50, Organism=Escherichia coli, GI1788764, Length=168, Percent_Identity=36.9047619047619, Blast_Score=109, Evalue=1e-25, Organism=Escherichia coli, GI87082099, Length=235, Percent_Identity=33.6170212765957, Blast_Score=99, Evalue=3e-22, Organism=Escherichia coli, GI1787369, Length=172, Percent_Identity=28.4883720930233, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1787080, Length=162, Percent_Identity=30.2469135802469, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1787713, Length=237, Percent_Identity=28.2700421940928, Blast_Score=61, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 23878; Mature: 23747
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLLTSADHDAIALSIRVALAATLLSIPFGFAYAYLMTFCRFRGKVLLEVLVNLPLTLPP CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVMGYLLLLALGKNGWLSFLLEPLGVRLIFTWKAAVLASAVVGFPLLVRSIRIAMEGIDS HHHHHHHHHHHCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLQASRTLGATRLDSLFSVVLPLSKAGVVAGSSLMFARSLGEFGATVIVAGNIPGATQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCE IPLAIYDYAGSPGAEGAALSLCVVAIAISVLVLLFHEALARKLAGRD EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PLLTSADHDAIALSIRVALAATLLSIPFGFAYAYLMTFCRFRGKVLLEVLVNLPLTLPP CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH VVMGYLLLLALGKNGWLSFLLEPLGVRLIFTWKAAVLASAVVGFPLLVRSIRIAMEGIDS HHHHHHHHHHHCCCHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLLQASRTLGATRLDSLFSVVLPLSKAGVVAGSSLMFARSLGEFGATVIVAGNIPGATQT HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHCCCEEEEECCCCCCCCE IPLAIYDYAGSPGAEGAALSLCVVAIAISVLVLLFHEALARKLAGRD EEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]